Gene Clim_0749 details

Gene Information

• Locus tag: Clim_0749
• ID: 6356030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 820755
• End bp: 821264
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642668374
• Product: peptidoglycan-associated lipoprotein
• Protein accession: YP_001942809
• Protein GI: 189346280
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000000395754
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACAG GAATTAAGGG ACTTGTTATA ATAGCCATGA TTGCAACGGC TGGTTGTTCA 
TCAAAAAGCG CTGTTACCTC TGCGGATAGC GGAGCGGATT CATCTTCGTC AATGCAGGGC 
GGATCTTCTT CAGGTTCAGT GTCATCATCC GGATCGTATG GATTTGATGA ATGGCAGACC 
GGTCCTCTCG GGGATGTTTT TTTCGATTAT GACAGTTCGA TTCTCGCAAC TGAAGCCCAG 
AATCGATTGA CGCAGAATGC TGCATGGCTG AAAAGCAATG CCGGCAAATC TGTTGTTATC 
GAAGGTCATT GCGATGACAG AGGAACTTCT GAATACAACA TTGCTCTTGG TGAGCGCAGG 
GCCGTAACGG CAAAAGAATT TATCGCAAGA CTTGGCGTTT CCGCATCCCG TCTTGAAACG 
GTTACATATG GCGAGGAGCG TCCTTTTGAC AAAGGGCAGA ATGAAGAGGC CTGGGCAAAA 
AACAGGCGGG CCCATTTTGT TGTGAAGTGA 

 

Protein sequence

MKTGIKGLVI IAMIATAGCS SKSAVTSADS GADSSSSMQG GSSSGSVSSS GSYGFDEWQT 
GPLGDVFFDY DSSILATEAQ NRLTQNAAWL KSNAGKSVVI EGHCDDRGTS EYNIALGERR 
AVTAKEFIAR LGVSASRLET VTYGEERPFD KGQNEEAWAK NRRAHFVVK