Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0742 |
Symbol | |
ID | 6356023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 812770 |
End bp | 814467 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642668367 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001942802 |
Protein GI | 189346273 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.853368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATCTG ATACGGTAAA GACAGGATTT GAAAAAGCTC CGCACCGCAG CCTTCTGAAG GCTACCGGAG CTATCGCCTC CAACAATGAT TTCAGAAAGC CCTTCATCGG CATCTGCAAC TCATTCAATG AACTTATACC CGGCCACGCC CACCTTCAGG AACTGGGAAG AATCGCAAAA GAGGAGGTCC GCAAGGCAGG AGGCGTTCCT TTCGAGTTCA ATACCATCGG CGTTTGCGAC GGCATCGCCA TGGGTCATAT CGGCATGCGC TACTCTCTTG CAAGCCGCGA GCTCATTGCC GACAGTGTTG AAACCGTTGC CGAGGCACAT CGTCTTGACG GCCTGGTCTG CATACCCAAC TGCGACAAGA TCACCCCCGG CATGATGATG GCTGCTCTGC GTATCAACAT ACCTGTTATT TTCGTTTCGG GAGGTCCGAT GAAGGCCGGA TGTACCCCAT CGGGAAAAAC CGTTGACCTG ATCTCGGTTT TCGAGGCCGT CGGACAGTGC AGTACCGGAG AGATCACGGA ATCCGAGCTT GAGACCATCC AGGACAGCGC CTGTCCCGGA TGCGGATCGT GTTCCGGCAT GTTTACCGCC AATTCAATGA ACTGCCTCTC GGAGGCTCTC GGCATAGCAC TTCCCGGTAA CGGAACGATT CTTGCAATCG ATCCGAGACG TAACGAACTG GTCCGCGAAG CCTCGCGAAA AATTGTCGAT CTGGTCAACA ACGACATACG GCCCAGGGAC ATCATAACCA GAAAATCCCT GCTCAACGCC TTTGCCCTTG ATTTTGCCAT GGGGGGCAGC ACCAATACGA TCCTGCACAC CCTGGCCATC GCCAATGAAG CGGAACTGGA TTTCGACTTC TCGGAACTCA ATGCCCTTTC GGCTAAAACG CCGTATATCT GCAAAGTCAG TCCGGCCACC ATGGATGTCC ACATCGAGGA TGTCGATCGT GCCGGCGGCA TTTCAGCCAT ACTGAAAGAA CTCAGCCGTG TCGACGGTCT TCTCGACCTC TCGGCACCGA CCGTTACCGG AAAAACACTC GGAGAGAATA TTGCCGGCGC GGAAGTGCTT GACAGAAACG TCATCAGAAG CATCGAAAAC CCATACTCCG CAACGGGCGG TCTGGCCGTT CTTTACGGAA ATCTGGCCCC GCAGGGTGCC GTCATCAAAA CCGGCGCCGT CAGCCCTGAA ATGATGACCC ATACCGGACC GGCAAAAGTT TACGACTCGC AGGATGAAGC CATCAAAGGC ATCATGGACG GCGATATCTG CGCCGGAGAT GTGGTGGTTA TCCGATATGA GGGACCGAAA GGCGGACCGG GAATGCCTGA AATGCTCTCC CCTACCAGTG CCATCATGGG GCGCGGTCTC GGCGGTTCTG TCGCTCTCAT TACCGACGGC CGGTTCTCCG GCGGATCGAG GGGAGCATGC ATCGGCCACG TCTCGCCGGA AGCTGCCGAA AAAGGACCGA TCGCCGCGCT GGAAAACGGC GACATGATCA CCATCGACAT CCCGAACCGC TGTATCAGTG TCGATCTTCC GGAAACAGTC ATTGCCGGAC GTATTGCCGC TCTCAAGCCT TTCGAGCCAA AAATCAAAAA AGGCTACCTT GCGCGTTACG CACAACTTGT CACCTCGGCA AATACCGGGG CGATCATGAA AAACCCTGCT TACTGTGAAT CAAAATAA
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Protein sequence | MRSDTVKTGF EKAPHRSLLK ATGAIASNND FRKPFIGICN SFNELIPGHA HLQELGRIAK EEVRKAGGVP FEFNTIGVCD GIAMGHIGMR YSLASRELIA DSVETVAEAH RLDGLVCIPN CDKITPGMMM AALRINIPVI FVSGGPMKAG CTPSGKTVDL ISVFEAVGQC STGEITESEL ETIQDSACPG CGSCSGMFTA NSMNCLSEAL GIALPGNGTI LAIDPRRNEL VREASRKIVD LVNNDIRPRD IITRKSLLNA FALDFAMGGS TNTILHTLAI ANEAELDFDF SELNALSAKT PYICKVSPAT MDVHIEDVDR AGGISAILKE LSRVDGLLDL SAPTVTGKTL GENIAGAEVL DRNVIRSIEN PYSATGGLAV LYGNLAPQGA VIKTGAVSPE MMTHTGPAKV YDSQDEAIKG IMDGDICAGD VVVIRYEGPK GGPGMPEMLS PTSAIMGRGL GGSVALITDG RFSGGSRGAC IGHVSPEAAE KGPIAALENG DMITIDIPNR CISVDLPETV IAGRIAALKP FEPKIKKGYL ARYAQLVTSA NTGAIMKNPA YCESK
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