| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0689 |
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| Symbol | |
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| ID | 6354303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 762561 |
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| End bp | 764195 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642668316 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_001942751 |
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| Protein GI | 189346222 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.430174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCATTC CCCAGAAAAA AAAAGACAGC AGCATCAGCC TTCTGGCTGA AGTCAGCAGA
ACTGTAACGA TTGAAAAAGA TATCAGCAAG GTGCTCCGCC TGGTACTTTT CATCATGTCG
GAGCATATGG ATATGCTTCG CGGAATGATC ACCATTCTCA ACCGCGATAA TGACGAAATA
GTCATCAATG AATCATTCGG ACTGAGCGAA GAAGAAAAAG AACGTGGACG CTACCGGATA
GGAGAGGGCA TTATCGGTCA GGTCGTAAAA ACCGGTAAAC CGGTTCTGGT ACCAAATATC
AATGATGAAC CATTGTTCCT TGACCGTACC CGTTCCCGTC AGAAGGAGAG AACCGACGAC
CTTTGTTTCA TCTGCATTCC CATAAAGACG GGAACCGAGA TCATCGGAAC CCTCAGCGCC
GATCGTCAGA TTGAACCGCC ATTTCCCGAA GACCCGTCGA AACGGGCCAA AGCGGAAAGC
GAACGGATGG ACATGATGCA GCACTACGTC GACCTGCTTT CCATTATCGC GTCCATGATT
TCTCAGGCGG TAAGGCTCAA ACAGCTTGCT CACGAGGAGA ACTCGAATGG AACAGGCACA
ACGCACTCGC TGAAAGGGAA AAATCTGCTC ATCCCTCACC GGGACAATGA CAGCCATGAG
GAAGAGGTGG ATGAAACGGA ACGCCCGGCA AACATTATCG GCAATGCAAA ACCGATGATG
TCATTGTTCA AAATGATCGA CAAAATCGCA AAAACCAGTG CGACAACTCT GGTGCTGGGC
GAAAGCGGTG TAGGCAAAGA ACTCGTCGCC AGCGCCATTC ACTTTAAAAG CCGTCGCTCC
GACAAGCCGT TTATCAAATT CAATTGTGCA GCCCTACCGG AAAGCATTGT AGAAAGCGAG
TTGTTCGGCC ATGAAAAAGG CTCTTTTACC GGAGCCTCGG GTATGCGTCA GGGACGGTTC
GAGCTGGCCC ATACCGGCAC GATATTTCTT GATGAGATCG GAGAACTCAG CTTGCCGGTA
CAGGCGAAAC TGCTTCGCAT CCTTCAGGAA AAAGAGTTCG AACGGGTTGG CGGCTCGAAA
ACCATCAAAG TCGATGTCAG AGTTATTGCC GCAACCAACA GGAACCTGGA AAACCTCATC
CGTGAAGGAC AGTTCAGGGA AGATCTGTTC TATCGGCTGA ATATTTTTCC GTTGACCGTA
CCGCCGCTCA GGGAGAGAAA AACCGATATA CTGCTGCTCG CAGATTACTT CGTCGAAAAA
TATAACCGGA TCAACCAGAA AGGAATCCGC CGAATTTCAA CGACATCGAT AGACATGCTG
ATGCGCTACC ACTGGCCCGG CAATGTGCGT GAACTGGAAA ACTGCATGGA ACGAGCGGTC
ATTCTCAGCG AAGATAACGT CATTCACGGC TATCACCTTC CGCCAAGCCT GCAGACTGCG
GAATCGAGCG GCACCCCGTA TACCGGCTCA CTGCAGCAAA AGCTTGACTC GATCGAAAAT
GAAATGATCA TCGAAGCGCT CAAACGCACA AAAGGAAATA TGTCACGGGC GGCTATACAA
CTCGGCCTCT CGGACAGAAT CATGGGGTTA CGGGTAAAAA AATTCAACAT CGACTATCGA
AAGTTCCGTA TATGA
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| Protein sequence | MLIPQKKKDS SISLLAEVSR TVTIEKDISK VLRLVLFIMS EHMDMLRGMI TILNRDNDEI
VINESFGLSE EEKERGRYRI GEGIIGQVVK TGKPVLVPNI NDEPLFLDRT RSRQKERTDD
LCFICIPIKT GTEIIGTLSA DRQIEPPFPE DPSKRAKAES ERMDMMQHYV DLLSIIASMI
SQAVRLKQLA HEENSNGTGT THSLKGKNLL IPHRDNDSHE EEVDETERPA NIIGNAKPMM
SLFKMIDKIA KTSATTLVLG ESGVGKELVA SAIHFKSRRS DKPFIKFNCA ALPESIVESE
LFGHEKGSFT GASGMRQGRF ELAHTGTIFL DEIGELSLPV QAKLLRILQE KEFERVGGSK
TIKVDVRVIA ATNRNLENLI REGQFREDLF YRLNIFPLTV PPLRERKTDI LLLADYFVEK
YNRINQKGIR RISTTSIDML MRYHWPGNVR ELENCMERAV ILSEDNVIHG YHLPPSLQTA
ESSGTPYTGS LQQKLDSIEN EMIIEALKRT KGNMSRAAIQ LGLSDRIMGL RVKKFNIDYR
KFRI
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