| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0664 |
|---|
| Symbol | thiH |
|---|
| ID | 6354278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 737153 |
|---|
| End bp | 738220 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642668291 |
|---|
| Product | thiamine biosynthesis protein ThiH |
|---|
| Protein accession | YP_001942726 |
|---|
| Protein GI | 189346197 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.428424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC TACCTGGATG GCTGAGCGCC GGACATGATG AAACCCGCTT CAGGGCCATG
CTTTCGCCGG ATTCGCCATA CACCCTCGAA CAGCTTGCGG GAGAGTCGAA AGCCATAACC
CTCCGCAGAT TCGGACGCAC CATGTCGCTC TACGCGCCGC TCTACCTTTC GAATCACTGT
TCGAGCGGCT GTGCCTACTG CGGCTTCGCC TCCGACAGAA AAACCCCTCG ACGCCGCCTC
GAACAGGAAG AAATCCGAAA AGAACTCGGA GCCATGAAAC GCCTCGGCAT CAGCGATGTT
CTGCTCCTGA CCGGAGAACG TACCAAAGCT GCGGATTTCG ACTACCTCAG AACCTCCGTC
GCCACTGCCG CAGCCGACAT GCAGCGTGTT ACGGTAGAAG CCTTTCCCAT GAGCGTCGCC
GAATACCGTG ACCTCGCTGA AGCGGGCTGT ACCGGCATAA CGATCTACCA GGAGACTTAC
GATCCCCTGC GCTACGCCGA ACTCCACCGC TGGGGTCCGA AAAAAGATTT CAGGGAACGG
CTTGAAACGC CATCGAGAGC CCTTGAAGGA GGCATCAAAA CCGTAGGCCT CGGCGTCCTG
CTCGGACTTG CCGACCCGCA GGAGGACGCG CTCATGCTCT ACCGTCATCT TCGTTATCTC
GGAAAAACCT ACTGGCGAGC CGGACTTTCG GTATCATTTC CGCGTATACG GCCGCAGACC
GGCAGTTACG AGCCGCCCTT CCCGGTAAGC GATCACCTGC TGGCACGCAT GATCTTTGCC
TTCCGCATAG CCCTTCCCGA TGTGGAACTT GTGCTCTCCA CCCGTGAAAG CCCGGCTTTC
CGCGACGGCA TGGCCGGCAT CGGCGTCACC CGAATGAGTA TCGCAAGCCG CACGACGGTT
GGCGGATACC TCGATGCAGA ATCCAGCGAC CGGGGACAGT TCGATGTCTT CGACGACCGC
ACGGCAGAAG CGTTCTGCAG CGCTCTGCGC GAAAAAAACA TCGAACCGGT TTTCAAGAAC
TGGGAACACG CCTATAACGG TCCGTCACAT CCGGAAGCGG AAAAATAA
|
|---|
| Protein sequence | MNLLPGWLSA GHDETRFRAM LSPDSPYTLE QLAGESKAIT LRRFGRTMSL YAPLYLSNHC
SSGCAYCGFA SDRKTPRRRL EQEEIRKELG AMKRLGISDV LLLTGERTKA ADFDYLRTSV
ATAAADMQRV TVEAFPMSVA EYRDLAEAGC TGITIYQETY DPLRYAELHR WGPKKDFRER
LETPSRALEG GIKTVGLGVL LGLADPQEDA LMLYRHLRYL GKTYWRAGLS VSFPRIRPQT
GSYEPPFPVS DHLLARMIFA FRIALPDVEL VLSTRESPAF RDGMAGIGVT RMSIASRTTV
GGYLDAESSD RGQFDVFDDR TAEAFCSALR EKNIEPVFKN WEHAYNGPSH PEAEK
|
|---|
| |