Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0639 |
Symbol | |
ID | 6354087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 716933 |
End bp | 717451 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642668270 |
Product | Lipocalin family protein |
Protein accession | YP_001942705 |
Protein GI | 189346176 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCAATA AACTTTTTTT TCTTGTTGTG CTGCTTCTTT CCGGCTGCAC AGGAGTGCCC GAAGGGCTTG TCGTAGTCGA TGATTTCAGG CTCGATCGCT ACCTCGGCAG CTGGTATGAG ATTGCCCGGA TCGAGAATTC GTTCGAAAAG AATCTCGGGC AGGTTTCAGC CGAGTATTCC CTTCGGGAGG ACGGGAGCGT GAAAGTGAAG AACAAGGGGT ATGATGCTGA TAAAGGGGAG TGGAAGTCCA TTGAAGGCAA GGCAGCTTTT ACAGGCGATC CAACGCAAGG CGCCCTTAAG GTATCGTTTT TCGGCCCGTT CTATGCCGGC TACAATGTTG TGGCTCTCGA CAGGAAGAAC TACTCCTGGG CTCTCGTCTG CGGACACAAG AAATCCCTGT TCTGGATTCT CGCCCGCAAG CCTGAAATGG AACCGGTGCT GCTGCAGCAG CTTGTTGCCA AAGCCGACTC TCTCGGGTTC GAGACGGCGA AGCTCAGGTA TTTCGAGAAG CCGAGGTAG
|
Protein sequence | MINKLFFLVV LLLSGCTGVP EGLVVVDDFR LDRYLGSWYE IARIENSFEK NLGQVSAEYS LREDGSVKVK NKGYDADKGE WKSIEGKAAF TGDPTQGALK VSFFGPFYAG YNVVALDRKN YSWALVCGHK KSLFWILARK PEMEPVLLQQ LVAKADSLGF ETAKLRYFEK PR
|
| |