| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0631 |
|---|
| Symbol | trpD |
|---|
| ID | 6354079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 709041 |
|---|
| End bp | 710096 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642668262 |
|---|
| Product | anthranilate phosphoribosyltransferase |
|---|
| Protein accession | YP_001942697 |
|---|
| Protein GI | 189346168 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCACA AGGATTTTCT TCACAAGCTG CTCTCCGGAG ACCATTTTTC GCAGGAGGAG
ATGACTCAGT GCATGAACGC CATCATGAAC GGGGTTTTTC CTGATACCGT TATTGCCGCT
CTGCTCGCTC TTCTGGAGCA CAAAGGGGTA ACCTCCACAG AAGTTGCCGG AGCGTATTAC
AGTCTTATCG CAAAGGCCAA CACCATCGAT CTCTCTCCCG ATGCCGTCGA TACCTGCGGT
ACCGGCGGCG ATCATGCCGG CACCTACAAT ATTTCCACTA TCGGCTCAAT CATCGCCAAC
AGCACCGGCG TTTCCATTGC CAAACACGGA AACCGTTCGG TTACAAGCAG CTGCGGCAGC
GCCGACGTGC TCGAGGAGCT TGGATTCCGT ATCGACCTGC CTGTGGAAGC CACCGTGGAA
CTCTATGCCC GGACAGGGTT TTCATTCCTC TTCGCCCCGC TCTTCCACCC GTCGATGAAA
CGGGTTGCCC ATATACGCAA GGAACTTGGC ATAAGAACCA TATTCAACAT GCTCGGCCCT
CTTATCAACC CTGCGCGATC AAAAAGGCAG CTTGTCGGTG TTTACAGCAG CGAGCTCATG
GAACTCTATA CCGAAGTGCT CCTGCAGACC GGTACACGCC ACGCCATGAT TGTGCATGCG
ATGACTGAAG AAGGCGTCTC CCTCGATGAA CCAAGTCTTA ACGGACCGAC CTATATTGTT
GAAATCCAGA ACGGATATGT CTGTCGGCAT ACAGTCTATC CGGAGGATTT CGGTCTCGAC
AGACATCCGC TTTCGGCCAT TCAGGGAGGA GAGCGAAAGC AGAATGCCGC TATCATCAGA
AGCATTCTCG ATGGCAGCGC TTCACCGGCG CAGATCGATG CAGCTCTCTA TACCTCGGCA
ATGGCCTGTT ACGTATCCGG ACATGCAAGG TGCATCGATG ACGGCCTCAC CATATCAAGA
GAATCGCTTG AAAGCGGCGA TACCGACAGA AAATTCAGGG AGATTCTTGA CTTTAACGCA
GAACTTTCTG CCCGTTACAG GGAAGCGGTG AACTAA
|
|---|
| Protein sequence | MGHKDFLHKL LSGDHFSQEE MTQCMNAIMN GVFPDTVIAA LLALLEHKGV TSTEVAGAYY
SLIAKANTID LSPDAVDTCG TGGDHAGTYN ISTIGSIIAN STGVSIAKHG NRSVTSSCGS
ADVLEELGFR IDLPVEATVE LYARTGFSFL FAPLFHPSMK RVAHIRKELG IRTIFNMLGP
LINPARSKRQ LVGVYSSELM ELYTEVLLQT GTRHAMIVHA MTEEGVSLDE PSLNGPTYIV
EIQNGYVCRH TVYPEDFGLD RHPLSAIQGG ERKQNAAIIR SILDGSASPA QIDAALYTSA
MACYVSGHAR CIDDGLTISR ESLESGDTDR KFREILDFNA ELSARYREAV N
|
|---|
| |