| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0617 |
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| Symbol | |
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| ID | 6354065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 692752 |
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| End bp | 694491 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642668248 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001942683 |
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| Protein GI | 189346154 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAACG GCAGTAACAG CCATGTCATG CGTTTCCGGT TTCTTCGGTA CATGTTTTTC
CTGCTTCCGG TTATCGCTTT TCCGTTTCTG TCTTCGTGTA CTCCCCGATT CGCGGCCTCA
CATGAGGTTT CCATGCCCGC AACCGTCCGG GACAGTTCGG CAGAACATGC AAAAAATCGT
TTTATAGCTG CGTTGCTGCT TGCCGAGAAA GGTGATTTCT GGGGAGCGAT TGACGGATAC
CGCAGCGTTC AGCTTAACGG TTCTTTTGCG GAGGCCGCAC GTGATCATGC CATATCCGCT
TCCTTTCTTG AGCTTGGGGT GATCGATTCT GCACGGGTCT ATGCCGAAAA AGCCGCAGCA
GGCGAGCCGG AAAACCGGTA TTATCTCAGG ATGCTTGCCG CTGTCGCTCA TCTGATGAAA
GATTATCCGA GGGCAGTCGA AATTTACCGG CAGCTTGTTC AGCTTGAGCC GCAAAACAGC
GATTATCTTA CGTTGCTAGC CCTTGAGCAC ATTGCCGCCG GGGATCCGGA ACAGGCTCTG
GGAATTTTTC AGCGTCTCCT TTCGCTCGAT CCCTCCAATA ACAGTACACG CTCTCAGGTA
CTTCTGCTTG AAATCAAGCT GAAACATTAT GAGAATGCGA TAGAAACGCT ATCGGCACTG
ATCGAGGAGG GTGAAGAGAA AGAGCGCCTG AAGCTTACCC TTGGAGAGCT CTATGTGGAA
ACCGGCCAGA ACGGGCCTGC ATCGAAAACC TTTCGGGAGA TTATTGCTGC CAATTCCCGT
TTCGTTCCGG CCTGGCTCGC TCTGCTCGAG CTTTCGGTCA AGTCCGGCGA CAGCGGGAGG
TTTCAGCTTG ATCTCGATGC ATTCTATGAT ACTTCAGGCC TCAAATTCGA TCAGAAAATA
ACGCTTGCCG AGCTGTTTTA TGTCAGATCG GCAAGGGATA GCGCCTATGC GGATCCATTC
AGGGGAATGA TCACCGCAAT CGAGAAACGT CATCCGGGGG AGCCGAAAGT CAGGCTTCTC
AAAGGGAGAT TGCTTCTGAG GGAAAAACGT TCGTTCGAGG CGGTGGCCGA GTTCAGGGCT
GTGCTTAAAA AAGAGCCTTC AAATATCGAA GCACGGGAGG AGCTTGTTTC CGCCTATCTT
TTGCAGAAAG AGTATGCGAA AGCTGCCTAT GAGGTTGAGC AGGTAAAGAA ACTTCCGTCG
GTGTCGCGGA TGAGAGTTCT TGTACTTGAC GGATATACGG CTTTTCAGTC GGGAAATACC
CGAAAAGCCG CATTGACGCT CGAAAAAGCC ATCAAGCTTG GAGGCAAGGA AAAGGAGCGC
TGGCTCTACC TCCAGGCGGC TTCGACGCTT GCCATGTGTT ATGACAAGCT CGGGAATGCA
GAGAGGAGCA TGGCCATGTA TCGGGACATT CTGCTGCTCG ATCCCGCTAA CGTCCTTGCG
CTGAACAACT ATGCCTATCT TCTTGCCCTT CAGGGTCGGG AACTCGATAC GGCAAAGAAA
ATGGCACTGC AGGCGGTGGG GAATGAACCG GATAATCCCG TCTATCTGGA TACGCTGGGA
TGGGTGCTTT ATAAACTGGG AGAGTTTACC GATGCTCTCG GTTACCTTGA AAAAGCGGTA
CTCCTCGCTC CTGTTGAAGC GGAAATCGCC GAGCATCTTC TTGATGTGTA TGAGAAACTT
GGATTGGAGG AGAAAGCGGT TCTCCAGCGG GAAAAAGTGA AGCGATTGAG AGGCAAATAA
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| Protein sequence | MINGSNSHVM RFRFLRYMFF LLPVIAFPFL SSCTPRFAAS HEVSMPATVR DSSAEHAKNR
FIAALLLAEK GDFWGAIDGY RSVQLNGSFA EAARDHAISA SFLELGVIDS ARVYAEKAAA
GEPENRYYLR MLAAVAHLMK DYPRAVEIYR QLVQLEPQNS DYLTLLALEH IAAGDPEQAL
GIFQRLLSLD PSNNSTRSQV LLLEIKLKHY ENAIETLSAL IEEGEEKERL KLTLGELYVE
TGQNGPASKT FREIIAANSR FVPAWLALLE LSVKSGDSGR FQLDLDAFYD TSGLKFDQKI
TLAELFYVRS ARDSAYADPF RGMITAIEKR HPGEPKVRLL KGRLLLREKR SFEAVAEFRA
VLKKEPSNIE AREELVSAYL LQKEYAKAAY EVEQVKKLPS VSRMRVLVLD GYTAFQSGNT
RKAALTLEKA IKLGGKEKER WLYLQAASTL AMCYDKLGNA ERSMAMYRDI LLLDPANVLA
LNNYAYLLAL QGRELDTAKK MALQAVGNEP DNPVYLDTLG WVLYKLGEFT DALGYLEKAV
LLAPVEAEIA EHLLDVYEKL GLEEKAVLQR EKVKRLRGK
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