| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0613 |
|---|
| Symbol | |
|---|
| ID | 6354061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 687953 |
|---|
| End bp | 688945 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642668244 |
|---|
| Product | HPr kinase/phosphorylase |
|---|
| Protein accession | YP_001942679 |
|---|
| Protein GI | 189346150 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism |
|---|
| TIGRFAM ID | [TIGR00679] Hpr(Ser) kinase/phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.796182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTG ATCAGAAGGG GATGAAAAAG CGATCGATAA CGGTCGCCTA TTTTTTTGAG
AATATCGGAC GGAATCACGA TATCAAGTTG CGGAGGCTGA ACAGGGTCGA TGAACAGAAA
CGGCGAATTT CCGAGCGTGA GCTTCACCGT CCGGGCCTTG CGCTTGCCGG GTTCACCAAC
CTCTTTACCT ACAAACGGGT GCAGATTCTC GGCAATACCG AGACTCGTTT TCTCAACAAT
CATGATGAGG CCGAGCGTAG AAAAGCGTTT GAAAATCTCG TGCGCTTCAA GGTTCCCTGC
ATTATCCTGA CCAGCACCAA CAAGCTCCAG CCAGAGCTGC TCGAAATGGC AACCGAAGCC
GGTGTTCCCG TGTATGCAAC CCGCCACTCC TCGACCAAGG CGATGTATCT GATCACCGAT
TTTCTTGACG ATCAGTTTTC GCTGCACCAG CAGTATCATG GCTCCATGGT GGATGTCTGC
GGCGTAGGGG TTCTGCTGAC CGGAAAAAGC GGACTTGGAA AGTCGGAAAT AGCGCTCGAT
CTTATCGAGC GGGGTCATGG ACTTGTTGCC GATGATGTCG TGATTATCCG GCGTAAAGGC
GAGTCTCTGG TGCTCAATGC GAGACGAAAC GATATTATCG ATCATTTTAT GGAAATCAGA
GGTTTGGGCG TTGTTGATGT GAAGGCTAAT TTCGGCATCA GGGCAATTCG CGACATCAAG
GATGTGCAGG TGGTTGTCGA ACTGCTTGAA TGGAATCGCG AGACGGATTA TGAACGTCTT
GGTCTCGATA TGAAATCCAT CAAGATTCTC GGCGTCGAAG TTCCGCTTGT TCAGTTGCCT
ATTTTCCCGG GAAAAAATAT TGCGGTCATC ATCGAGGTCG TTGCACTGAA CTTCCTTCTG
AAACACTATT CGAACTATGT TGCCGCAGAA GCCTTGACTG AACGGATCAG AACCTCTATC
GATAAAGGAA ACGAACAGGA TGATGAAAGC TGA
|
|---|
| Protein sequence | MNFDQKGMKK RSITVAYFFE NIGRNHDIKL RRLNRVDEQK RRISERELHR PGLALAGFTN
LFTYKRVQIL GNTETRFLNN HDEAERRKAF ENLVRFKVPC IILTSTNKLQ PELLEMATEA
GVPVYATRHS STKAMYLITD FLDDQFSLHQ QYHGSMVDVC GVGVLLTGKS GLGKSEIALD
LIERGHGLVA DDVVIIRRKG ESLVLNARRN DIIDHFMEIR GLGVVDVKAN FGIRAIRDIK
DVQVVVELLE WNRETDYERL GLDMKSIKIL GVEVPLVQLP IFPGKNIAVI IEVVALNFLL
KHYSNYVAAE ALTERIRTSI DKGNEQDDES
|
|---|
| |