| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0602 |
|---|
| Symbol | |
|---|
| ID | 6354050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 674253 |
|---|
| End bp | 675236 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642668233 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001942668 |
|---|
| Protein GI | 189346139 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.154872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCAC AGCATCAGCT CCTCTCGGCA AAGGATATTT TCGTTCATTT TCCGCTTAAA
TCAGGGGGTG TGTCGGGTAA GGCGCGGCGG GTGAGTGCCG TTAACGGGGT TTCGTTCGAG
GTGAACAAAG GCGAAACCCT CGGTCTTGTC GGCGAGTCGG GGTGCGGGAA AACCACTCTC
GGCAGGGCGC TTATGCGTAT CGGGCACGGG ATTGTCGACG GAACGGTCGT GTTTGACGGC
AGGGAGATAT CCTCGTTGAG CAACCGCGCC TTCGGCCCTT TGCGCAAAGA GATGCAGATG
ATTTTTCAGG ACCCCTACGG GTCGCTCAAT CCCAGGCTGA CCATCGGCCA GACGATTGCC
GAGGTGCTTG CCGTTCACCG GCTGGCAAAA GGTGAGGCTG CCCGCAAAAA AACCCTTGAA
CTGCTTGACA TTGTTGGATT GAACAGCGAG TATGCCGACC GGTATCCGCA TGAGTTTTCA
GGAGGGCAGC GGCAGCGGGT GGGCATTGCA AGAGCACTTG CGGTAAATCC GTCCTTTATC
ATCTGCGATG AACCGGTATC CGCTCTCGAT GTTTCGATTC AGTCGCAGAT CATCAACCTC
CTGAAAGATC TCCAGCGGGA TTTCGGACTT ACCTATCTGT TTATCGCTCA CGATCTTTCG
GTTGTCGAAT ACATTTCGGA CCGCGTCGCG GTGATGTATC TGGGTAAAAT CGTCGAGATC
ACCTCATCGC AGGAACTCTA TACCAATCCC AAACACCCCT ATACGCGCGC GCTGCTCTCG
TCCATACCTG TTCCGGAGCC TGACGGAAAA AAAGAACGGA TTCTTCTCAA AGGGGATCTT
CCGGGCCCGA TGCATATCCC TTCCGGCTGC AGCTTTCATC CGCGTTGTCC GGTTGCGAAG
CCGGAGTGCA GCAAGAGGGA GCCCCGGCTG CTGCCGCTCG ACGGGAACGA TGCCCATCGG
GTGAGTTGTC TGCTCTATGA GTGA
|
|---|
| Protein sequence | MNPQHQLLSA KDIFVHFPLK SGGVSGKARR VSAVNGVSFE VNKGETLGLV GESGCGKTTL
GRALMRIGHG IVDGTVVFDG REISSLSNRA FGPLRKEMQM IFQDPYGSLN PRLTIGQTIA
EVLAVHRLAK GEAARKKTLE LLDIVGLNSE YADRYPHEFS GGQRQRVGIA RALAVNPSFI
ICDEPVSALD VSIQSQIINL LKDLQRDFGL TYLFIAHDLS VVEYISDRVA VMYLGKIVEI
TSSQELYTNP KHPYTRALLS SIPVPEPDGK KERILLKGDL PGPMHIPSGC SFHPRCPVAK
PECSKREPRL LPLDGNDAHR VSCLLYE
|
|---|
| |