Gene Clim_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0601 
Symbol 
ID6354049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp673402 
End bp674154 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content53% 
IMG OID642668232 
ProductUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 
Protein accessionYP_001942667 
Protein GI189346138 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.157549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTTCTG AACACAGACA TAGCGGAACG CTCTATGTGG TTGCGACGCC ACTCGGCAAC 
CTCGACGATA TTACCCTGAG AGCCATAAAA ACACTCGCAA ACTCCGAAGC GATCGCCTGC
GAAGATACCC GGAGAGCCTC CATTCTTCTG CGGCATCTCG GAATTACAGG AAAACAGCTG
GTCAGTTACC ACGACTTCAA CGAACCGGCG GCAATCAGCC GCATCGCCCG CCTGCTTGAA
GAAGGGCTGG ATGTATCACT CATTACCGAT GCGGGAACGC CGGTCATCAG CGATCCCGGA
TATCTCATGG TTCGCACGCT CAGAGAAAAA GGGTTCACCG TTCTCCCCAT TCCGGGACCG
AGCGCCCTGA CGGCAGCACT CTCCGTCTGC CCTCTGCCGG TAAGCAGTTT TCTCTTTGCC
GGCTTTCTTC CCCACAAAAA AGGGAGACAA AGCCGTCTGG AATACCTCTC GTCGCTCGGC
ATGACCTTCG TGCTTTACGA GTCCCCTTAC CGGATAAAGA AGCTGCTCGA TGAGCTCACC
GCACATCTGC CCGATGCGGA GATATTCATT GCCCGGGAGA TGACAAAAAT TCACGAAGAG
TACCTTGCCG GAACTGTCGA AAACATAAAA GAACAACTCC CTGATGAAAA AATACGGGGA
GAGTTTGTCG TGGTCGTTCA TCCGGCAAAC AGCAAAAATA CCGGCAAAAA CACCTTACCC
AACAAGTACG AGCAACATGC AGATCATCAC TGA
 
Protein sequence
MPSEHRHSGT LYVVATPLGN LDDITLRAIK TLANSEAIAC EDTRRASILL RHLGITGKQL 
VSYHDFNEPA AISRIARLLE EGLDVSLITD AGTPVISDPG YLMVRTLREK GFTVLPIPGP
SALTAALSVC PLPVSSFLFA GFLPHKKGRQ SRLEYLSSLG MTFVLYESPY RIKKLLDELT
AHLPDAEIFI AREMTKIHEE YLAGTVENIK EQLPDEKIRG EFVVVVHPAN SKNTGKNTLP
NKYEQHADHH