Gene Clim_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0579 
Symbol 
ID6354027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp653356 
End bp654330 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content52% 
IMG OID642668213 
Productesterase, putative 
Protein accessionYP_001942648 
Protein GI189346119 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC GACGTATCAA CGCCTTATTG CTTGTCGCTG TTTTTGTGTC ATTTTTGCCC 
TTCGAACTTG CGTTCGGGGA GGGTGATCTT CAGCGGCAGA CAGTGATGCA GGGATCAATT
GAGCGAACAT TTTATGTTCA TTATCCCAAG AACAGGCACC CGGCAGTTCC CAAGGCCCTC
GTGTTCGTTC TCCATGGCGG GGGCGGTGCC GATGCCCGGA CGATGGCAAA CCGCACCGGC
ATGAATGAGA TTGCTGACCG GGAAGATTTC ATGGTCATCT ATCCTGCCGG GATTGATGGA
CAATGGAATG ATGGTCGAGG AAAAAGTTTC AGGAGAACGA AGGATAACAC CGACGTTGAC
GATGTTGGAT TCATCTCCGC CCTGATTGAT CTCTTTGTAA AAAAGGGCGA AGCAGACAGC
GCCAGGATAT ATGTGATGGG ACTGTCCAAT GGCGGCATGA TGACACATCG ACTGGGAATC
GAACTTGGGA AGAAACTTGC GGCGATAGCC CCGGTCATTG CCAACATGCC TGAGAATATT
TCTGATCAAA AGGTTGCGAT GGCTCTGCCG GTGCTCATCA TGAATTGTAC TGATGATCCC
ATGATGCCCT GGAAAGGTGG ACATGTCCGG GTTCTTGGCA AGGAGTACGG TACAGTTCTG
TCCACGGACA AGACGGTGCG CTATTGGGTT GCCGCGGCAC AGCTTCCGCT TAAGCCAGAG
ACACGCTATC TCGATGACGT CTCACGCAGC GATAAATGCA CAGTTGAAGT TGATCGTTAC
TCGGCAGCGG GAAGACGAAC CGAGGTTGTT CTCTATCGTA TCAGGGGAGG CGGGCACAAC
CTTCCTGGAG GCAACACACC GGATCGGCCG AGGTTGCTGG GGCCGAAGTG CATGGATATA
AGCGGCTCGG AAGCCATCTG GTCATTCTTC AAAAAATATT CTCGCGCCAA ACGCATCGCT
TCAGCCGGAC AATGA
 
Protein sequence
MKIRRINALL LVAVFVSFLP FELAFGEGDL QRQTVMQGSI ERTFYVHYPK NRHPAVPKAL 
VFVLHGGGGA DARTMANRTG MNEIADREDF MVIYPAGIDG QWNDGRGKSF RRTKDNTDVD
DVGFISALID LFVKKGEADS ARIYVMGLSN GGMMTHRLGI ELGKKLAAIA PVIANMPENI
SDQKVAMALP VLIMNCTDDP MMPWKGGHVR VLGKEYGTVL STDKTVRYWV AAAQLPLKPE
TRYLDDVSRS DKCTVEVDRY SAAGRRTEVV LYRIRGGGHN LPGGNTPDRP RLLGPKCMDI
SGSEAIWSFF KKYSRAKRIA SAGQ