Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0571 |
Symbol | |
ID | 6354019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 642393 |
End bp | 643592 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642668206 |
Product | hypothetical protein |
Protein accession | YP_001942641 |
Protein GI | 189346112 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.039235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCAGAA CTCAGCGAAA AACAAGTAAG TATTTGGAGC TATATAGGAA AACCTTCAAG AAAAAGGTTG ATTGTGTTCT TGGCTTTACG CCGCCTTTTA CATCCAAGGA GGGGTTCCTA TGTTTATTTG AAGAGATTTA TCCCGGTGAT GTTCAAAGCA TCGAAAAGCA CTATCAGTTC TATCAGGAGA AAAACAAAAG ACGAACAACC GGTAAGCCAC TATATTTTCC AAGCCCCGCA GAGCTTTTGT TTGATATTTC TCGTGTGAAA ATCAGTAAAA TCTCAGAAAT CACATGGAAT GCGGATGAGG CTAACGAGAG GAAGAATGAA GCTTTAGAGG AAGCCAAGTT AGAGCAAGAA AGGAAGAAAG AGAAATATCG ACAAAATAAT ATATCAACGC AGGAAGTAAC TCCACAATAT ATTAACACCC TGATCGAAAG GTACTGGAAA GAGGGGGAAA AAATACTGCG TCTTTATATT GCTCAAGAAT GCGCAAAGTA CAAAAACTCA AAAACTATTT TATTTTTCCG TCAAGTTCTA TATGGAGAAA ATGATTGGTT TATAAAAAAC GTGGCATTCA GAACACTTCA AAGGTTTGAT GAAGTAGTAT ATCTTCCGCC AAAAGGTGAG GGAAAGCGTG ATAAATACAA CAGTTTGGTT GATATGTTCG GCTGTGATTA CAAAGATGAC ATTGGCAAAG GACCTCTCGA TATTATGAAT GAATTTTATG AAAACAACTA TATTCAGACT TTGAGAGATT TTGACGTATT CATATCGCAT TCTGTATCAA ACGCTAAAAT TGTAGATGAT CTTGTACAAC AACTGAATAA CTCAGGATTG GTCGCATTCG TTGACTGGAA AAGTGACAGG GCGGACCTAA AACGCAGTAA ATCGAATCAG TATACGGCTG ATGTCCTCCA ATTAAGAATG CGTCAGTCAA AGTGTCTATT TCTCATTAGG ACCAAAGAAG CCGATTCGTC GATATGGGTT TCCTGGGAGA TAGGATACTT TACTGCGCTG GATAGGAAAG TGGTTGTTCT TAATGTTGGG GATGCCTTAG ACCAAGGACC AGAATTCATT CATGGCTTGC CTAGAGTTTA TTTCAAGAAC AATGAATTAC ATGTAGAAGA AGGTGCGCTA AGTATCGATT TCGTTAGTTG GTTGAATCAG GAAGAAAGGA AATCAAGCGA AAGAAATTAA
|
Protein sequence | MGRTQRKTSK YLELYRKTFK KKVDCVLGFT PPFTSKEGFL CLFEEIYPGD VQSIEKHYQF YQEKNKRRTT GKPLYFPSPA ELLFDISRVK ISKISEITWN ADEANERKNE ALEEAKLEQE RKKEKYRQNN ISTQEVTPQY INTLIERYWK EGEKILRLYI AQECAKYKNS KTILFFRQVL YGENDWFIKN VAFRTLQRFD EVVYLPPKGE GKRDKYNSLV DMFGCDYKDD IGKGPLDIMN EFYENNYIQT LRDFDVFISH SVSNAKIVDD LVQQLNNSGL VAFVDWKSDR ADLKRSKSNQ YTADVLQLRM RQSKCLFLIR TKEADSSIWV SWEIGYFTAL DRKVVVLNVG DALDQGPEFI HGLPRVYFKN NELHVEEGAL SIDFVSWLNQ EERKSSERN
|
| |