Gene Clim_0562 details

Gene Information

• Locus tag: Clim_0562
• ID: 6354913
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 637336
• End bp: 637815
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642668198
• Product: TspO and MBR like protein
• Protein accession: YP_001942633
• Protein GI: 189346104
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGGCT CTGCTGCAAA GTTAGCTCTC TCTCTCGCGC TTTGTTTTTC TGCCGCGTTT 
ACGGGCAGCC TGTTTACTCC CGAAAAGGGT TCCGCGTGGT ATTACGGGGA ACTCGTCAAG 
CCATCCTGGA ACCCGCCCGA CTGGCTTTTC CCTCCGGCCT GGAGCCTGCT GTTTCTGCTA 
ATGGCGATAG CGTTCTGGAT TGTGCTGAAA GCGGGCCTCG AAAAAAACGA AGTCAGGACG 
GCAATCGCGT TTTTCGCTCT GCAGCTCTTC CTGAACATGA GCTGGTCAGC AGCGTTTTTC 
GGGCTGCAGA ACCCTCTTGC CGGCCTTCTG GTGATCATCC TGCTCTGGCT CGCTATAGTC 
ATGACCATCG TGCGTTTCAG GGCGGTTTCA GCCACGGCGG GTTATCTGCT TGTGCCGTAC 
CTGATGTGGG TCAGTTTTGC CGCGTTTCTG AACTTTACGA TATGGCAGCT TAATCCCTGA 

 

Protein sequence

MKGSAAKLAL SLALCFSAAF TGSLFTPEKG SAWYYGELVK PSWNPPDWLF PPAWSLLFLL 
MAIAFWIVLK AGLEKNEVRT AIAFFALQLF LNMSWSAAFF GLQNPLAGLL VIILLWLAIV 
MTIVRFRAVS ATAGYLLVPY LMWVSFAAFL NFTIWQLNP