Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0559 |
Symbol | |
ID | 6354910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 632970 |
End bp | 634373 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642668195 |
Product | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase |
Protein accession | YP_001942630 |
Protein GI | 189346101 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.542245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATTC ACCAGCGCAC CCTGCAACAA GAAGTCTCGC TACAGGGCTC GGGACTGCAT ACCGGAAAGG AATGCATCAT CACCTTCAAA CCGGCTCCTG TCAATTACGG ATACCGTTTT ATACGTACCG ACCTTGAAGA CCAGCCTGAA ATTCCCGCCC TGATTGAAAA CGTCGTCGAT GTCCTCAGGG GGACAACCAT TGCCGTCAAC GACGTGAAAA TTCATACGAC CGAACATGTT CTTGCCGCCC TTTACGGACT GCAGATCGAC AATTGCCGGA TTGAAATGAG CGGTCCCGAA CCTCCGGTCA TGGACGGAAG TTCGCTGCCG TTTGCAGAAC GGCTTCTGAG CGCCGGAATC GTCGAGCAGG ATGAACCGAA AAACTATCTG GTCATCGATG AAACCGTAGA ATATCACGAC ACGAAAAACA GCGTCGATAT TGTTGCCCTG CCGCTGGACA GCTTCAGGGT GACGGTTATG GTCGATTATA AAAATCCCGC TCTCGGCTCG CAGCATTCCG GACTTTTCGA TCTCCAGAAA GAGTTCATGC AGGACTTCGC GCCATGCCGG ACATTCTGTT TTCTGAGCGA AGTGGAAGCG CTGGCAAATC AGGGAATCAT CAAGGGCGGA GATATCGACA ACGCGGTCGT CATTGTCGAT AAAACCATGC AGAAAGATGA ACTCGAAGCG CTTGCCGAAA AACTCGGCAT TGGAAGCGCC AAACTCACAA CCGGAGAAAA CGGCATACTG AACAACCGGG AACTGCGCTT CACCAATGAA CCGGCACGGC ACAAGCTGCT TGACCTGCTC GGCGACATAG CCCTTCTCGG CATGCCGATC AAGGCCCAGG TTCTCGCCGC AAGACCGGGA CATGCATCAA ACGTGGAATT TGTCAAACAG CTGAAAAAGT ATGCCGATCG CAATAAACTC GCCCGGCAGT TTCAGCATGA GAAAAAGGCC GGGGTTGTTT TCGATATCAA TGCCATTCAG AACATCCTGC CCCACCGCTA TCCGTTCCTC CTGATCGACA AGATCGTCGA GTTCAAGCTC GACGAAAAGA TCGTGTCCAT CAAGAATGTC ACCATGAACG AGCCCTTCTT TCAGGGGCAC TTCCCCGGCA ATCCGATCAT GCCGGGCGTT CTGATACTCG AAGCCATGGC CCAGACAGGC GGCATCATGA TGCTGAACGG CAACGAAAAC ATCAAGGAGA GCGTGGTGTA CTTCATGGGC ATCGACAAGG CCCGCTTCCG CAAACCGGTT CTGCCCGGCG ACACGCTTGT CATCGAAGCC GTCATGACCA ACAAACGCAG AACCGTCTGC CAGTTCGACG CAAAAGCCTT TGTCAGGGGC GAACTGGTCT GCGAAGCCTC GCTTATGGCT ACCGTAGTAT CGAAAAACAA GTAA
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Protein sequence | MLIHQRTLQQ EVSLQGSGLH TGKECIITFK PAPVNYGYRF IRTDLEDQPE IPALIENVVD VLRGTTIAVN DVKIHTTEHV LAALYGLQID NCRIEMSGPE PPVMDGSSLP FAERLLSAGI VEQDEPKNYL VIDETVEYHD TKNSVDIVAL PLDSFRVTVM VDYKNPALGS QHSGLFDLQK EFMQDFAPCR TFCFLSEVEA LANQGIIKGG DIDNAVVIVD KTMQKDELEA LAEKLGIGSA KLTTGENGIL NNRELRFTNE PARHKLLDLL GDIALLGMPI KAQVLAARPG HASNVEFVKQ LKKYADRNKL ARQFQHEKKA GVVFDINAIQ NILPHRYPFL LIDKIVEFKL DEKIVSIKNV TMNEPFFQGH FPGNPIMPGV LILEAMAQTG GIMMLNGNEN IKESVVYFMG IDKARFRKPV LPGDTLVIEA VMTNKRRTVC QFDAKAFVRG ELVCEASLMA TVVSKNK
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