| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0558 |
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| Symbol | |
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| ID | 6354909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 630881 |
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| End bp | 632596 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642668194 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001942629 |
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| Protein GI | 189346100 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.175836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCT ACAGCTGGGT ACGGCTTGAA CCACAGGAAA AGCAGGTTTC TCTTCTGGCT
GGCGCGATCA ATGTCAGCCA TCCTCTTGCA CGGGCATTAT GCAATCGGGG GATAACCACG
TTTGAAGAGG CCAAAACATT TTTTCGCCCT TCAATCAGCC AGCTCTCATC TCCCTTTCTG
CTGCAGAATA TGGAGCGTGC GGCAGAACGG GTTATTGCCG CCTTGAACAA CCATGAAAAA
ATTCTGCTTT ACGGCGACTA TGACGTGGAT GGAACAACCG GCACGGCGCT GCTCTGTTTG
TTTCTCAGGG ATCAGGGGGC GGAAGTTTTC TACTATATAA ACGACCGCTT TACCGAAGGA
TACGGTCTTT CGTCAGAGGG CATAGCGTAT GCCGAAAAAT CCGGGGTATC GCTTATCATT
ACGATTGATT GCGGCATTCG GGCCGGAGAG GCAATTGAAC GGTGCGCACA GGCCGGTATC
GATGTAATTG TGTGCGATCA CCATGAACCG GATGAACTGC CGCCCGCCTT TGCCATTCTC
AACCCCAAGG TGCCGGAGTG TACCTATCCA TTCCGGGAGC TCTGCGGCTG TGCCGTTGCC
TTTCGTCTCG TTCAGGCCGT TGCGGAACGA CTTGGCGCCG GCGAAGAGAG CTGGAAGCAA
TATCTCGATC TTGTTGCCAT AGCAACAGCC GCCGATATGG TGTCGCTGGA AAAGGAGAAC
CGCATCCTTG TCAATGAGGG GCTGAAGCGG ATCAGGATAT CTCCGCGAAA AAGCCTTTCC
GGCATGCTTT CTGTCATGGG AATCGATGCC GGTACGATGA CCATGTATCA TATTGCTTTC
GGTCTTGCGC CGAGGATCAA TGCCGCAGGA CGGATGCATT CGGCACATCT TGCCGTTGAA
TGGCTGCTTG CCGCAACGGA AACAGGAGCT CTTGAAACAG CGCAGGCGCT CGACCGGATG
AATCTGGAGC GCCGTGAGAT CGACACCGCT ATTTTTTCAA GGGCTGACAG AATGATCGAG
GGGCATTTCG CTTCATACTG TTCTTCAATT GTGCTCTACG ATGAGGAGTG GCATCTTGGC
GTGCTCGGCA TCGTCGCTTC CAGAATGCTT GAAAAGTATT ATCTGCCGAC CGTAATCATG
GGCAGCATGA ACGGCATGAT CAAAGGCTCG GTGAGGAGTG TCGAGGGGAT CAATATTTAT
GAGGTTCTCC AGGAGTGCAG CGATCATCTC GTTCAGTTTG GCGGCCATAA CCAGGCAGCC
GGCATAACGC TCAGGCCGGA AGATCTGGCC GGTTTCAGAA AGAAGTTCGA CAACATATGC
GCAGCTCTGC TTCCCGCGGA TAAACGGCAG AAAGAGCTCG TCATCGATTC GTCGCTGCAG
CTCGAGGAGA TTACTGCCAA TTTCATGAAT GTGCTCGATC AGTTTGCTCC ATACGGGTTT
GGAAACCGCG AACCGGTTTT CGAGACTTCT GCAGTAGTGC TTGTCGGGCG TCCGCGACTG
CTTAAGGAAA AGCATGTGAA ATTTTCGGTT CGCGACGGAA ACGGACGTCT TTTCGATGTG
ATCGGGTTTG ACCGGAAGGA TGTTTTTCAG ATTCTCGACG CCGATCCGGG CATACGGTTC
TCGATGGCCT ATTCGCTCGA GAAAAGGAGC TGGAATAACC GCGAACAGTG GCAGCTCCGG
CTCAAGGACC TTGATGCCGG GAAATCCGTA TCCTGA
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| Protein sequence | MKRYSWVRLE PQEKQVSLLA GAINVSHPLA RALCNRGITT FEEAKTFFRP SISQLSSPFL
LQNMERAAER VIAALNNHEK ILLYGDYDVD GTTGTALLCL FLRDQGAEVF YYINDRFTEG
YGLSSEGIAY AEKSGVSLII TIDCGIRAGE AIERCAQAGI DVIVCDHHEP DELPPAFAIL
NPKVPECTYP FRELCGCAVA FRLVQAVAER LGAGEESWKQ YLDLVAIATA ADMVSLEKEN
RILVNEGLKR IRISPRKSLS GMLSVMGIDA GTMTMYHIAF GLAPRINAAG RMHSAHLAVE
WLLAATETGA LETAQALDRM NLERREIDTA IFSRADRMIE GHFASYCSSI VLYDEEWHLG
VLGIVASRML EKYYLPTVIM GSMNGMIKGS VRSVEGINIY EVLQECSDHL VQFGGHNQAA
GITLRPEDLA GFRKKFDNIC AALLPADKRQ KELVIDSSLQ LEEITANFMN VLDQFAPYGF
GNREPVFETS AVVLVGRPRL LKEKHVKFSV RDGNGRLFDV IGFDRKDVFQ ILDADPGIRF
SMAYSLEKRS WNNREQWQLR LKDLDAGKSV S
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