| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0543 |
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| Symbol | |
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| ID | 6354894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 612809 |
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| End bp | 613555 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642668179 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001942614 |
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| Protein GI | 189346085 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACA ATCCTGCAGG AATTCTTTTT GCCGTGCTGA CCGTATTGCT CTTCGCCGCA
TGTCCGGTCT ATGCCGGGGA TGAAGCGGAC GCTTATTTTT CTTCCGGCAG TTCGAAGTTC
GATAAAAAGG ATTATGCCGG CGCCATTGCG GATTTTACCA GAACTGTCCA GCTCGATGCA
AAAGCCTCGC GGGCTTACCA TAACAGGGGA ATCGCAAAAA TGAAAATCGG CGACAGGCCG
GGAGCAATAC AGGACTTCAT AAGGGTTATC GAGATTGACC CGCAGCTTGC AGAGGCTTTT
CTCGACGGGA AAGATGGCGC TTCGGGCCGG GAAGATGAAA AGGAGAGTGC GGTTGATCCT
GCAAGGGTGT ATCCTGCCGA TCTTGTCCCC GCATATGCAT TCGCTTTCGA TAACCGAGGA
TTGCTGAAAT ATATCCAGGG GGACTACAAG GGGGCAATCG ATGATTTTAC GGTGGCTATC
GCTCTCGATC CGAAATGCGC ATTGCCATAT AAACATCGCG GTTATGCAAA GAACGACCTG
CAGGATTATC CGGCGGCGAT CGAGGATTAT TCCAGGGCGA TCAAGCTCGA TAAAAAATCC
GGGGAGGTTT ACCGCGAGAG GGGGCTTGCA AAAGAACTGG CCGGTGATAC GGAGGGCGCT
TTCGCTGATT TTAAAAAAGC GGCGAAGCTT GGCGACGAGA TTTCCGATAA AAAGCTTAAA
GACCGGGAGG TTTCGGAAGA GTCGTGA
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| Protein sequence | MMNNPAGILF AVLTVLLFAA CPVYAGDEAD AYFSSGSSKF DKKDYAGAIA DFTRTVQLDA
KASRAYHNRG IAKMKIGDRP GAIQDFIRVI EIDPQLAEAF LDGKDGASGR EDEKESAVDP
ARVYPADLVP AYAFAFDNRG LLKYIQGDYK GAIDDFTVAI ALDPKCALPY KHRGYAKNDL
QDYPAAIEDY SRAIKLDKKS GEVYRERGLA KELAGDTEGA FADFKKAAKL GDEISDKKLK
DREVSEES
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