| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0540 |
|---|
| Symbol | |
|---|
| ID | 6354891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 610317 |
|---|
| End bp | 611042 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642668176 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001942611 |
|---|
| Protein GI | 189346082 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG2884] Predicted ATPase involved in cell division |
|---|
| TIGRFAM ID | [TIGR02673] cell division ATP-binding protein FtsE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00247085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAT TCGTCAGCGT TGACCTTGAG CTCAACAAAA AGCCCATATT CCGGAATCTG
AACCTGAGCG TTCAGTCCGG TGAACTGGTC TATATCGTCG GAAAAAGCGG CAGCGGCAAA
ACGACGCTCC TGAAGTCGCT CTATATGGAA ATCCAGCCTA AAAAGGGAGA GATCCAGATC
GCCGGATACA ACTCCCGTAC CATCAGAAAA AGACAGATCC CGCATCTGCG CAGAAAGCTG
GGCATCGTTT TCCAGGATTT CCGTCTGCTC GAAGATCGCA ATATATACGA CAATCTTGCT
TTTGTGCTGA AAGTGACAGG AACAAAGGAG AAGCTTATCA AGGAAAAGGT TGCGCATGCC
CTGCAAAGCG TAGGCCTGGA GCATGCAGCA AGGCAGATGC CGCTGAACCT TTCAGGAGGA
GAGCAGCAGC GGGTCGCCAT AGCGAGGGCT ATTGTGCGTG AGCCTCTGGT AATACTGGCC
GACGAACCAA CCGGAAACCT CGACCCGGAT ACTTCTATCG AAATTCTTGA GTACCTGAAA
CGAATCAATC AGAAAGGAAT CACGACACTT ATCGGAACGC ACGACTACGA ACTGGTGCGC
CACTCCCCGT CAAGAACCCT TCAGATCAGC GACATGAACC TTGCCGAATC ATGTCTGGTC
GAGTCGGAAA CAGGATACCG ACCGGCTCTG ACAACAGGCA CAAAAACTGC TGAAACCGGT
TTATAA
|
|---|
| Protein sequence | MISFVSVDLE LNKKPIFRNL NLSVQSGELV YIVGKSGSGK TTLLKSLYME IQPKKGEIQI
AGYNSRTIRK RQIPHLRRKL GIVFQDFRLL EDRNIYDNLA FVLKVTGTKE KLIKEKVAHA
LQSVGLEHAA RQMPLNLSGG EQQRVAIARA IVREPLVILA DEPTGNLDPD TSIEILEYLK
RINQKGITTL IGTHDYELVR HSPSRTLQIS DMNLAESCLV ESETGYRPAL TTGTKTAETG
L
|
|---|
| |