Gene Clim_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0526 
Symbol 
ID6354877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp594406 
End bp595020 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content49% 
IMG OID642668162 
ProductSNARE associated Golgi protein 
Protein accessionYP_001942597 
Protein GI189346068 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.115863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTCA TCGCTTCCCT GCAGAATATC CGCACCCTTG ACGAATTGAT TCTCTGGGGG 
GGATATCTCC TGCTCTTCAC CATCATTTTT GCCGAAACCG GACTGTTTGC CGGGTTTTTT
CTTCCCGGCG ACTCCCTCCT GATCACTGCA GGACTTATCG CTGCATCGGG CCGGCTCGAC
ATTACCACCG CTCTGGCTAC CATGGCGGCA GCTGCGGTTT TAGGGGATTC AACCGGTTAT
CTGATAGGCA AACAGTTGCA GAAATCGATT TTCAGTAAAA AGGAGACTCT TTTTTTTCAC
CGCGATCATC TCGATAAAAC TGAAGCGTTT TACCGTAAAC ATGGAGCAAA AACCATCTTC
CTTGCACGCT TCGTACCCGT CGTTCGCAGT TTTGCTGCAA CGCTTGCCGG AGTCGCAGCT
ATGCCGTACC CTGTTTTTCT TTTTTACAGC CTCACCGGAG CTGTACTCTG GGTGCTTTGT
TTCACGCTCA CAGGATATTA TATAGCAAGT ATGTTCCCTG AGGTTGTTCA ATACCTCCAT
ATTTTCATTA TGGTCGGGAT AGTACTGATT GTTCTCAGTG CCCTGCGCCA TCTGAAACCG
GGAAAACATT CATAA
 
Protein sequence
MLLIASLQNI RTLDELILWG GYLLLFTIIF AETGLFAGFF LPGDSLLITA GLIAASGRLD 
ITTALATMAA AAVLGDSTGY LIGKQLQKSI FSKKETLFFH RDHLDKTEAF YRKHGAKTIF
LARFVPVVRS FAATLAGVAA MPYPVFLFYS LTGAVLWVLC FTLTGYYIAS MFPEVVQYLH
IFIMVGIVLI VLSALRHLKP GKHS