Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0498 |
Symbol | groEL |
ID | 6354845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 564527 |
End bp | 566170 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642668131 |
Product | chaperonin GroEL |
Protein accession | YP_001942570 |
Protein GI | 189346041 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000658221 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGCTA AAGATATTAT TTTTGATTCC GACGCCAGAG CAAAGCTCAA AGTCGGTGTG GACAAACTGG CTAATGCCGT GAAAGTTACC CTCGGACCTG CCGGACGAAA TGTGCTTATC GATAAAAAGT TCGGAGCTCC GACCTCGACC AAAGATGGCG TGACCGTAGC AAAAGAGATC GAACTTGCCG ACGCCGTCGA GAACATGGGC GCACAGATGG TTCGCGAAGT CGCTTCGAAA ACCAGTGATG TCGCCGGTGA CGGTACTACT ACCGCGACGG TGCTTGCTCA GGCAATCTAC CGTGAGGGGC TGAAGAACGT TGCCGCAGGT GCACGTCCGA TCGATCTTAA AAGAGGTATC GACCGTGCCG TGAAAGAGGT TGTCGCAGAA CTGCGCAACA TCAGCCGCAG CATCTCCGGC AAAAAGGAGA TCGCACAGGT CGGCACCATT TCAGCCAACA ACGATCCTGA AATCGGCGAA CTGATCGCAG AGGCCATGGA CAAGGTCGGC AAGGACGGCG TTATCACCGT CGAAGAGGCA AAGGGCATGG ATACCGAGTT GAAGGTTGTC GAGGGCATGC AGTTCGATCG CGGCTACCTC TCTCCGTATT TCGTGACCAA TCCCGAAACC ATGGAAGCCG AAATCGAAGA CCCGCTGATC CTCATTCACG ACAAGAAGAT CGGCAACATG AAAGAACTGC TTCCGATCCT CGAAAAATCA GCCCAGTCAG GTCGTCCTTT GCTCATCATT GCAGAGGATA TCGAAGGCGA AGCGCTGGCA ACCCTTGTGG TCAACAAGCT CAGAGGTACT CTGAAAGTCT GTGCCGTGAA GGCTCCGGGA TTCGGCGACC GTCGCAAGGC AATGCTCGAG GATATCGCCA TTCTTACCGG CGGTACCGTG ATTTCCGAAG AGAAGGGCTA TAAACTCGAA AATGCAACGC TTGCCTACCT CGGTCAGGCA GGTCGTGTCA ACATCGATAA GGATAACACC ACTATTGTCG AAGGCAAAGG CACACAGGAG GACATCAAGG CCCGCATCAA CGAAATCAAA GGCCAGATCG ACAAATCGAC TTCCGACTAC GATACCGAAA AGCTGCAGGA GCGTCTTGCA AAGCTTTCCG GCGGTGTCGC TGTGCTGAAC ATCGGCGCAT CAACCGAAGT TGAAATGAAG GAAAAGAAAG CCCGCGTCGA AGATGCACTG CATGCCACCC GCGCTGCAGT CCAGGAAGGC ATCGTGGTCG GCGGCGGTGT TGCTCTGATC CGTGCGATCA AAGGTCTCGC CAATGCGGTT GCAGACAATG AAGACCAGAA AACCGGTATC GAGATCATCC GCCGCGCGCT CGAAGAGCCG CTCCGTCAGA TTGTTGCCAA TACCGGCACC ACCGACGGCG CTGTCGTGCT TGAGAAAGTC AAGGCAGCTG AAGGCGACTT CGGCTTCAAC GCACGTACCG AGCAGTACGA GAACCTTGTT GAGGCAGGTG TTGTCGATCC GACCAAAGTA ACCAGAAGCG CTCTTGAAAA TGCCGCTTCG GTTGCCAGCA TCCTTCTTAC CACCGAAGCA GCCATTACCG ACATCAAGGA AGAGAAATCT GACATGCCGG CAATGCCTCC GGGCGGCATG GGCGGCATGG GCGGCATGTA CTGA
|
Protein sequence | MTAKDIIFDS DARAKLKVGV DKLANAVKVT LGPAGRNVLI DKKFGAPTST KDGVTVAKEI ELADAVENMG AQMVREVASK TSDVAGDGTT TATVLAQAIY REGLKNVAAG ARPIDLKRGI DRAVKEVVAE LRNISRSISG KKEIAQVGTI SANNDPEIGE LIAEAMDKVG KDGVITVEEA KGMDTELKVV EGMQFDRGYL SPYFVTNPET MEAEIEDPLI LIHDKKIGNM KELLPILEKS AQSGRPLLII AEDIEGEALA TLVVNKLRGT LKVCAVKAPG FGDRRKAMLE DIAILTGGTV ISEEKGYKLE NATLAYLGQA GRVNIDKDNT TIVEGKGTQE DIKARINEIK GQIDKSTSDY DTEKLQERLA KLSGGVAVLN IGASTEVEMK EKKARVEDAL HATRAAVQEG IVVGGGVALI RAIKGLANAV ADNEDQKTGI EIIRRALEEP LRQIVANTGT TDGAVVLEKV KAAEGDFGFN ARTEQYENLV EAGVVDPTKV TRSALENAAS VASILLTTEA AITDIKEEKS DMPAMPPGGM GGMGGMY
|
| |