Gene Clim_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0495 
Symbol 
ID6354842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp560847 
End bp563705 
Gene Length2859 bp 
Protein Length952 aa 
Translation table11 
GC content52% 
IMG OID642668128 
Productexcinuclease ABC, A subunit 
Protein accessionYP_001942567 
Protein GI189346038 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0204806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATTT CCCCGTTAAC GGAGACGGTT CCTGACGGTA CCGCTCTTCC CGATATTGTG 
TTCAAGGGGA TTCGTACTCA TAATCTGAAG AACATTTCGG TCAGTATTCC GAGGAATCGT
TTTGTCGTGC TGACCGGGGT GAGTGGTTCC GGAAAATCAA GCCTTGCTTT CGATACGCTG
TATGCCGAGG GGCACCGTCG TTATGTCGAG TCTCTTTCCG CTTATGTCCG CCAGTTTCTT
GAGCGGATGC CGCGTCCGGA CATAGAGGTT GTCGAGGGGA TTGCACCGGC TATTGCAATC
GAGCAGAAAA CCATTCCGAA GAATCCCCGC TCAACGGTTG GTACGGTCTC CGAGATTTAT
GATTACCTTC GTCTGCTTTA TGCCCGTATC GGTAAAATCT ACTCCCGAGA TACCAGTGAA
CTTGTTTTGA AACACACTCC AGAAGATGTG AGCTATCAGG CCCGTTTTTT CGATGAGGGT
GCGAAGTTTT TTGTAGCCTT TCCGTTTCCA TGTCATAAAG ATGCCGCCAT GCATGATTGT
TCGGCAGCTG CGGAAATGGC CAACCTGCTG AAAAAGGGTT TTTTCAGGAT TCTCGAGGGC
GATGTTGTGC TCGATCTCAA CGAGGAAGCG CACTGTGCCC GTATCGGCAG GATGGGGCGT
CAGGAGCTTT CCTGTTTGCT GGTACTTGTT GACCGGTTTA TCGCCCGGCA GGACGACAAG
GTTTTCAGCA GGATCGAGCA GGCAGCGGAG ACCGCTTTCA GTGAATCGGG AGGATATGCG
GTACTCAAGG TTTTCGGAGG CAGAATGTTC AGATTCAGTG ACCGGCTGGA GCTGAACGGT
ATAGAATATC AGGAGCCCAC TCCCCAGCTT TTTGCTTTCA ATTCACCGAT CGGGGCCTGC
ACCACATGCC AGGGGTTCGG CAGGATTGCC GGAATCGATG AGGATATCGT TATTCCCGAT
AAATCCCTGA GCATTGCCGA AGGAGCCATT GTCTGCTGGA CATCGGAAAA ATACCGATGG
AACTGGAAGC AATTGCTCGC CTTAGCGCCG AAGGCCGATA TTCCTGTCGA TGTTCCCTAT
GAAAAGCTCT CTCATCAGCA TAAGGAGATG ATCTGGAAAG GCATTCCCGG CCAGGAAGAG
CGGTATGGCG GAATCTGGCC GTTTTTTGCT GAAATCGAAA AGGATGCCGG ATATAAAATG
CACTATCGGG TGTTTTTAAG CCGCTATCGC GGTTATGCGA CCTGTCCCGA TTGCGAGGGC
AGCCGCCTCA ATCCCGATGC AAGGCTTGTC AGGATTTCAG GCCGTCATAT AGGGGAGGTC
ACCCGTATGA ATATCGGTCA GGCCCTGGAT TTTTTTCTTT CTCTCGATAT TTCGCCCTTT
GACCGCAAAG TCGCTGAAGC GGTGCTCGAA GAGATCGTCA AAAGGCTTAA CTACCTGCTC
GATGTAGGTT TGAACTATCT AACGCTCGAC CGTCTTACAC ACACGCTCAG CGGAGGCGAG
TTTCAGCGTA TCAATCTGTC GACCTCTATC GGATCACCCC TTGTAGGGGC GATCTATATT
CTCGATGAAC CGAGTATCGG GCTGCACCAA AGCGATTCGG CGAGGTTGAT CAAGCTGCTC
AGGAAGCTGC GCGATCTCGG AAACACCGTT GTGGTGGTCG AGCACGACCG CGAAATTATC
GAAGCAGCCG ATTATGTCAT CGATCTCGGG CCGAAAGCCG GACGGTTCGG CGGAGAGGTG
GTGTTTCACG GCACCGTTGC CGAAATGTTT GAAAACGGCA CCTCCCTGAC GGCGGACTAC
CTGAATGGGA AAAAAGCGAT TCCGGTTCCC GAGGTTCGTC GAGAGCCCGA TTTTTCACGA
TCCATTGAAA TCCGGGGAGC CCTTCAGAAC AACCTCAAGA ATATTGATGT TCGTTTTCCG
CTCGATGTCA TGACCTGTGT GACCGGGGTC AGCGGTTCCG GTAAATCAAC GCTTGTCAAC
GACATTCTCA AGAACGGCAT TCTTCGTGAA AAAGAGGGTG GACGCGAAAA AGTCGGTACC
CATCGCTCTC TTTCGGGAGC AGCACTGATC GATCGCGTGG AGCATGTCGA TCAATCTCCC
ATAGGAAAGT CGAGCCGAAG CAATCCTGTG ACCTACCTGA AAATTTTTGA TGATATCCGT
ACTCTTTTTG CCCAGACCAG AGAGGCAAAA GAGCGAGGGT GGAAGGCCGG ATTTTTTTCT
TTCAACATTC CGGGAGGACG GTGCGAAAGC TGTGCCGGAG AGGGGAGTGT GAAAATAGAA
ATGCAGTTTC TTGCCGATAT TGAAGCGGTC TGCGAGGAGT GCAATGGCCT GCGTTACAGG
CAGGAGACAC TTGCCGTCAG GTATCGGGGA CTTTCCATAG CTGAAGTGCT CGATCTGACC
GTCAGCGAGG CTCTTGAGTT TTTCAGCAGC GAAAGGTCGA TTGTCCGCAA ACTGCAGGTT
CTCGATGAGG TCGGTCTCGG TTATATCAGG CTCGGTCAGT CTTCCAGCAC ACTTTCGGGT
GGCGAGGCTC AGCGGCTCAA GCTGTCAGGC TTTATAGCGC GTGCCGATAT TGAACATACA
CTCTTTCTTT TTGACGAGCC GACGACGGGA CTTCATTTTG AGGACATCAG CAAGCTGATC
CGCTGTTTTG AAAAACTGCT TGAGCAGAGA AATACCCTCG TTATAATCGA GCATAATCCC
GATGTGATCA AACAGGCCGA CTGGGTTATC GATCTCGGAC CCGGCGCGGG AGACCTGGGC
GGGGAGCTGG TTGCAGAAGG CACGCCTGAG ACCGTTGCGG CTTCCGCAAC GTCACTGACA
GGACTTCACC TGAGGGAGTA TCTTGCTCCG GCGGTTTGA
 
Protein sequence
MPISPLTETV PDGTALPDIV FKGIRTHNLK NISVSIPRNR FVVLTGVSGS GKSSLAFDTL 
YAEGHRRYVE SLSAYVRQFL ERMPRPDIEV VEGIAPAIAI EQKTIPKNPR STVGTVSEIY
DYLRLLYARI GKIYSRDTSE LVLKHTPEDV SYQARFFDEG AKFFVAFPFP CHKDAAMHDC
SAAAEMANLL KKGFFRILEG DVVLDLNEEA HCARIGRMGR QELSCLLVLV DRFIARQDDK
VFSRIEQAAE TAFSESGGYA VLKVFGGRMF RFSDRLELNG IEYQEPTPQL FAFNSPIGAC
TTCQGFGRIA GIDEDIVIPD KSLSIAEGAI VCWTSEKYRW NWKQLLALAP KADIPVDVPY
EKLSHQHKEM IWKGIPGQEE RYGGIWPFFA EIEKDAGYKM HYRVFLSRYR GYATCPDCEG
SRLNPDARLV RISGRHIGEV TRMNIGQALD FFLSLDISPF DRKVAEAVLE EIVKRLNYLL
DVGLNYLTLD RLTHTLSGGE FQRINLSTSI GSPLVGAIYI LDEPSIGLHQ SDSARLIKLL
RKLRDLGNTV VVVEHDREII EAADYVIDLG PKAGRFGGEV VFHGTVAEMF ENGTSLTADY
LNGKKAIPVP EVRREPDFSR SIEIRGALQN NLKNIDVRFP LDVMTCVTGV SGSGKSTLVN
DILKNGILRE KEGGREKVGT HRSLSGAALI DRVEHVDQSP IGKSSRSNPV TYLKIFDDIR
TLFAQTREAK ERGWKAGFFS FNIPGGRCES CAGEGSVKIE MQFLADIEAV CEECNGLRYR
QETLAVRYRG LSIAEVLDLT VSEALEFFSS ERSIVRKLQV LDEVGLGYIR LGQSSSTLSG
GEAQRLKLSG FIARADIEHT LFLFDEPTTG LHFEDISKLI RCFEKLLEQR NTLVIIEHNP
DVIKQADWVI DLGPGAGDLG GELVAEGTPE TVAASATSLT GLHLREYLAP AV