Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0495 |
Symbol | |
ID | 6354842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 560847 |
End bp | 563705 |
Gene Length | 2859 bp |
Protein Length | 952 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642668128 |
Product | excinuclease ABC, A subunit |
Protein accession | YP_001942567 |
Protein GI | 189346038 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0204806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATTT CCCCGTTAAC GGAGACGGTT CCTGACGGTA CCGCTCTTCC CGATATTGTG TTCAAGGGGA TTCGTACTCA TAATCTGAAG AACATTTCGG TCAGTATTCC GAGGAATCGT TTTGTCGTGC TGACCGGGGT GAGTGGTTCC GGAAAATCAA GCCTTGCTTT CGATACGCTG TATGCCGAGG GGCACCGTCG TTATGTCGAG TCTCTTTCCG CTTATGTCCG CCAGTTTCTT GAGCGGATGC CGCGTCCGGA CATAGAGGTT GTCGAGGGGA TTGCACCGGC TATTGCAATC GAGCAGAAAA CCATTCCGAA GAATCCCCGC TCAACGGTTG GTACGGTCTC CGAGATTTAT GATTACCTTC GTCTGCTTTA TGCCCGTATC GGTAAAATCT ACTCCCGAGA TACCAGTGAA CTTGTTTTGA AACACACTCC AGAAGATGTG AGCTATCAGG CCCGTTTTTT CGATGAGGGT GCGAAGTTTT TTGTAGCCTT TCCGTTTCCA TGTCATAAAG ATGCCGCCAT GCATGATTGT TCGGCAGCTG CGGAAATGGC CAACCTGCTG AAAAAGGGTT TTTTCAGGAT TCTCGAGGGC GATGTTGTGC TCGATCTCAA CGAGGAAGCG CACTGTGCCC GTATCGGCAG GATGGGGCGT CAGGAGCTTT CCTGTTTGCT GGTACTTGTT GACCGGTTTA TCGCCCGGCA GGACGACAAG GTTTTCAGCA GGATCGAGCA GGCAGCGGAG ACCGCTTTCA GTGAATCGGG AGGATATGCG GTACTCAAGG TTTTCGGAGG CAGAATGTTC AGATTCAGTG ACCGGCTGGA GCTGAACGGT ATAGAATATC AGGAGCCCAC TCCCCAGCTT TTTGCTTTCA ATTCACCGAT CGGGGCCTGC ACCACATGCC AGGGGTTCGG CAGGATTGCC GGAATCGATG AGGATATCGT TATTCCCGAT AAATCCCTGA GCATTGCCGA AGGAGCCATT GTCTGCTGGA CATCGGAAAA ATACCGATGG AACTGGAAGC AATTGCTCGC CTTAGCGCCG AAGGCCGATA TTCCTGTCGA TGTTCCCTAT GAAAAGCTCT CTCATCAGCA TAAGGAGATG ATCTGGAAAG GCATTCCCGG CCAGGAAGAG CGGTATGGCG GAATCTGGCC GTTTTTTGCT GAAATCGAAA AGGATGCCGG ATATAAAATG CACTATCGGG TGTTTTTAAG CCGCTATCGC GGTTATGCGA CCTGTCCCGA TTGCGAGGGC AGCCGCCTCA ATCCCGATGC AAGGCTTGTC AGGATTTCAG GCCGTCATAT AGGGGAGGTC ACCCGTATGA ATATCGGTCA GGCCCTGGAT TTTTTTCTTT CTCTCGATAT TTCGCCCTTT GACCGCAAAG TCGCTGAAGC GGTGCTCGAA GAGATCGTCA AAAGGCTTAA CTACCTGCTC GATGTAGGTT TGAACTATCT AACGCTCGAC CGTCTTACAC ACACGCTCAG CGGAGGCGAG TTTCAGCGTA TCAATCTGTC GACCTCTATC GGATCACCCC TTGTAGGGGC GATCTATATT CTCGATGAAC CGAGTATCGG GCTGCACCAA AGCGATTCGG CGAGGTTGAT CAAGCTGCTC AGGAAGCTGC GCGATCTCGG AAACACCGTT GTGGTGGTCG AGCACGACCG CGAAATTATC GAAGCAGCCG ATTATGTCAT CGATCTCGGG CCGAAAGCCG GACGGTTCGG CGGAGAGGTG GTGTTTCACG GCACCGTTGC CGAAATGTTT GAAAACGGCA CCTCCCTGAC GGCGGACTAC CTGAATGGGA AAAAAGCGAT TCCGGTTCCC GAGGTTCGTC GAGAGCCCGA TTTTTCACGA TCCATTGAAA TCCGGGGAGC CCTTCAGAAC AACCTCAAGA ATATTGATGT TCGTTTTCCG CTCGATGTCA TGACCTGTGT GACCGGGGTC AGCGGTTCCG GTAAATCAAC GCTTGTCAAC GACATTCTCA AGAACGGCAT TCTTCGTGAA AAAGAGGGTG GACGCGAAAA AGTCGGTACC CATCGCTCTC TTTCGGGAGC AGCACTGATC GATCGCGTGG AGCATGTCGA TCAATCTCCC ATAGGAAAGT CGAGCCGAAG CAATCCTGTG ACCTACCTGA AAATTTTTGA TGATATCCGT ACTCTTTTTG CCCAGACCAG AGAGGCAAAA GAGCGAGGGT GGAAGGCCGG ATTTTTTTCT TTCAACATTC CGGGAGGACG GTGCGAAAGC TGTGCCGGAG AGGGGAGTGT GAAAATAGAA ATGCAGTTTC TTGCCGATAT TGAAGCGGTC TGCGAGGAGT GCAATGGCCT GCGTTACAGG CAGGAGACAC TTGCCGTCAG GTATCGGGGA CTTTCCATAG CTGAAGTGCT CGATCTGACC GTCAGCGAGG CTCTTGAGTT TTTCAGCAGC GAAAGGTCGA TTGTCCGCAA ACTGCAGGTT CTCGATGAGG TCGGTCTCGG TTATATCAGG CTCGGTCAGT CTTCCAGCAC ACTTTCGGGT GGCGAGGCTC AGCGGCTCAA GCTGTCAGGC TTTATAGCGC GTGCCGATAT TGAACATACA CTCTTTCTTT TTGACGAGCC GACGACGGGA CTTCATTTTG AGGACATCAG CAAGCTGATC CGCTGTTTTG AAAAACTGCT TGAGCAGAGA AATACCCTCG TTATAATCGA GCATAATCCC GATGTGATCA AACAGGCCGA CTGGGTTATC GATCTCGGAC CCGGCGCGGG AGACCTGGGC GGGGAGCTGG TTGCAGAAGG CACGCCTGAG ACCGTTGCGG CTTCCGCAAC GTCACTGACA GGACTTCACC TGAGGGAGTA TCTTGCTCCG GCGGTTTGA
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Protein sequence | MPISPLTETV PDGTALPDIV FKGIRTHNLK NISVSIPRNR FVVLTGVSGS GKSSLAFDTL YAEGHRRYVE SLSAYVRQFL ERMPRPDIEV VEGIAPAIAI EQKTIPKNPR STVGTVSEIY DYLRLLYARI GKIYSRDTSE LVLKHTPEDV SYQARFFDEG AKFFVAFPFP CHKDAAMHDC SAAAEMANLL KKGFFRILEG DVVLDLNEEA HCARIGRMGR QELSCLLVLV DRFIARQDDK VFSRIEQAAE TAFSESGGYA VLKVFGGRMF RFSDRLELNG IEYQEPTPQL FAFNSPIGAC TTCQGFGRIA GIDEDIVIPD KSLSIAEGAI VCWTSEKYRW NWKQLLALAP KADIPVDVPY EKLSHQHKEM IWKGIPGQEE RYGGIWPFFA EIEKDAGYKM HYRVFLSRYR GYATCPDCEG SRLNPDARLV RISGRHIGEV TRMNIGQALD FFLSLDISPF DRKVAEAVLE EIVKRLNYLL DVGLNYLTLD RLTHTLSGGE FQRINLSTSI GSPLVGAIYI LDEPSIGLHQ SDSARLIKLL RKLRDLGNTV VVVEHDREII EAADYVIDLG PKAGRFGGEV VFHGTVAEMF ENGTSLTADY LNGKKAIPVP EVRREPDFSR SIEIRGALQN NLKNIDVRFP LDVMTCVTGV SGSGKSTLVN DILKNGILRE KEGGREKVGT HRSLSGAALI DRVEHVDQSP IGKSSRSNPV TYLKIFDDIR TLFAQTREAK ERGWKAGFFS FNIPGGRCES CAGEGSVKIE MQFLADIEAV CEECNGLRYR QETLAVRYRG LSIAEVLDLT VSEALEFFSS ERSIVRKLQV LDEVGLGYIR LGQSSSTLSG GEAQRLKLSG FIARADIEHT LFLFDEPTTG LHFEDISKLI RCFEKLLEQR NTLVIIEHNP DVIKQADWVI DLGPGAGDLG GELVAEGTPE TVAASATSLT GLHLREYLAP AV
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