Gene Clim_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0494 
Symbol 
ID6354841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand+ 
Start bp560329 
End bp560760 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content52% 
IMG OID642668127 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_001942566 
Protein GI189346037 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.371305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAGG TTTCAAGAAA ATTTGAATAC GGTCTTCACG CCGTAGCCTA TCTTGCCACA 
AAAGGGTCGG GTCGGGTTGT TACCGTGAAG GAGATGGCCG AATCCATCGG TTTCTCTCAG 
GAGTTTCTTT CAAAAGCGAT GCAGAGCATG AAGAAGGCAG GAATCACCGA GTCTGTTCAG 
GGGGTAAAGG GTGGTTACCG GCTTGCCCGG CACCCCTCAG TGATAACAAT TGCCGATATT 
GGTATCGCAA TCGAGGGCAA GCCTCATCTG ACCCGTTGCG CCGTGAAGCT CAGCAGTTGC 
GAAATAGCGG CTCATTGCGA CTATCGCGGA TACATGAATA CCCTGCAGGA TCGCATACAA 
AGTCTGATGG CTTCCACAAC GGTAGCTGAC ATACTGAAAC AGCCGGATTC CGGCGCTACA 
GCTCCGGAAT AA
 
Protein sequence
MLQVSRKFEY GLHAVAYLAT KGSGRVVTVK EMAESIGFSQ EFLSKAMQSM KKAGITESVQ 
GVKGGYRLAR HPSVITIADI GIAIEGKPHL TRCAVKLSSC EIAAHCDYRG YMNTLQDRIQ 
SLMASTTVAD ILKQPDSGAT APE