Gene Clim_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0493 
Symbol 
ID6354840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp559326 
End bp560198 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content50% 
IMG OID642668126 
Productalpha/beta hydrolase fold 
Protein accessionYP_001942565 
Protein GI189346036 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.5355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAC CACCAAAAGA CCGGTATTTC CTGTGGCAGT TGTCGTCTGA ACATGAAGCA 
AGAATCCGCT ATCAGGAATA CGGAATCGAA AATAACGGAA AACCTCCACT GCTTTTTATT
CACGGTTACG GAGCGATGAT CGAACACTGG GATCAGAATA TTCCACAATT CACTGACACG
TTCAAGGTCT ATGCCATGGA CCTCATCGGT TTCGGTAAAT CACAGAAACC CAACGTCCGA
TACAGTCTCG AGCTCTTTGC TGCCCAGATC GAGGCATTCC TGCATCTGAA AAAGCTTGAT
GAGGTCATTC TCGTAGGCCA CTCCATGGGA GCTGCAGGCA GCATCTATTA CGCACACCTC
AAACCGGAAA AGGTAAAAGC GCTGGTGCTC GCCAATCCTT CGGGACTCTA CGGTGACAGT
ATGGACGGCG TGGCAAAAGT GTTTTTCGGT CTTGTGGGCT CGCCAATGAT CGGAGAGGTG
CTCTTCACGG CTTTCGCCAA TCCTGTCGGT GTCAGTCAAA GTCTTCTCCC TACTTATTAC
AATCAGAGCC GGGTGGACAT GAAACTTATC AACCAGTTCA CCAGACCATT GCAGGACAAA
GGAGCGATCT GGTCATATCT CTCCCCATCC CGCCGACCCC AGGATTTCAC TCTCGATCAT
CTTGTCAGAC CCTGCCGGTA TAAAGGAACT GCTTTTCTTG TCTGGGGAGC CGAAGATACC
GCCCTGCCCC CTCATAAAAT CATCCCGGAG TTCCAGCAGC TGCTTCCGCA GGCGGGAGCC
TTCATCATTC CGAAAGCATC TCACTGCATT CACCACGACG TACCTCAAGC TTTCAACGAA
AGACTTGAGA GCATTCTTGA CTCGATACTC TGA
 
Protein sequence
MNTPPKDRYF LWQLSSEHEA RIRYQEYGIE NNGKPPLLFI HGYGAMIEHW DQNIPQFTDT 
FKVYAMDLIG FGKSQKPNVR YSLELFAAQI EAFLHLKKLD EVILVGHSMG AAGSIYYAHL
KPEKVKALVL ANPSGLYGDS MDGVAKVFFG LVGSPMIGEV LFTAFANPVG VSQSLLPTYY
NQSRVDMKLI NQFTRPLQDK GAIWSYLSPS RRPQDFTLDH LVRPCRYKGT AFLVWGAEDT
ALPPHKIIPE FQQLLPQAGA FIIPKASHCI HHDVPQAFNE RLESILDSIL