Gene Clim_0479 details

Gene Information

• Locus tag: Clim_0479
• ID: 6354474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 542291
• End bp: 542962
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642668110
• Product: peroxiredoxin
• Protein accession: YP_001942551
• Protein GI: 189346022
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0450] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGGAAC ATTTTGAAGA CCAGTTTTAT TACAACGAAG CGAACATGCC GCTTCTTGGG 
GATGAGTTCC CGGAAATGAA AGTCCAGACG ACACATGGAC CGATGAATAT CCCCGGGGAT 
CTCAAGGGAT CGTGGTTCGT TCTTTTCAGC CATCCGGCAG ACTATACCCC TGTATGCACA 
ACAGAGTTCC ATGCATTCCA GGAACGTATG GCGGATTTCG ACAAGCTCGG ATGCAAGCTT 
GTCGGCATGT CGGTCGATCA GGTTTTTTCC CATATCAAAT GGGTAGAATG GATAAAGGAT 
AATCTGGATA CCGAAATCAC CTTCCCGATC GTTGCCGCAA ATGACAGAAT TGCCATGCAG 
CTCGGCATGC TTCATCCGGG AAAAGGATCG AATACCGTTC GCGCCGTTTT CGTAGGCGAT 
CCTGAAGGGA AAGTGCGCCT TATTCTCTAC TACCCCCAGG AAATCGGCAG AAATATCGAT 
GAAATTGTCC GTGCCGTGAA AGCCCTGCAG GTTTCCGACG CCAACAAGGT AGCCATACCT 
GCAAACTGGC CGATCAACAC CCTGCTGAAA GACCGCGTCA TCATTCCGCC GGCGAACAAT 
ATCGAGGATG CGAAAAAACG TCCGTCTCAG TACGACTGTT ACGACTGGTG GTTCTGCCAC 
AAAGCGCTCT GA 

 

Protein sequence

MSEHFEDQFY YNEANMPLLG DEFPEMKVQT THGPMNIPGD LKGSWFVLFS HPADYTPVCT 
TEFHAFQERM ADFDKLGCKL VGMSVDQVFS HIKWVEWIKD NLDTEITFPI VAANDRIAMQ 
LGMLHPGKGS NTVRAVFVGD PEGKVRLILY YPQEIGRNID EIVRAVKALQ VSDANKVAIP 
ANWPINTLLK DRVIIPPANN IEDAKKRPSQ YDCYDWWFCH KAL