Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0478 |
Symbol | |
ID | 6354473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 541170 |
End bp | 542201 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642668109 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_001942550 |
Protein GI | 189346021 |
COG category | [R] General function prediction only |
COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTC GCATTCTCCC TTTTTTTCTC TTTTTTTTTG TATTTGTTCT CCCCGTTGTT TCTGCTGCAG ACGACTTCGA TGCTCTGTTT GTGCAAGCCG GGATGAAATA CCGGAAAGGC GATTTTCAGG GCGCATCGGC TCTGTATACT GCCGTGCTGA GCGGCAATCC GCGTTCTGCG GAAGCGTATA ACAACCGCGG GCTCTGTAAA GCAGCTTCAG GAGATGTCAC CGGCGCTGTT GCTGACTATT CCGAAGCCCT TAAACTCGAT CCGTCCCTGG CGGCGGCCTC CAATAACAGG GGCCTCGCAA TGGCAAAGAT CGGGAAGTAT CATGAAGCTG TTCTCGATTA TAATCAGGCC CTCCGTATCA ATGCCGTTCT GCCTGAAGTG TACAACAATC TCGGATTGGC CAGAATCGCA TTGGGAGATC AATCAGGAGC ACTCGACGAT TTCAATACGG CCCTTGCGCT TAAACCTTTT TATCCCGAAG CGCTTTTTAA CAGGGGGTGT GCCCGGCAGA AGCTGTCAGA ACACCGGGAA GCTCTTCGGG ACTTTCAACA GGTCATATCC TTCAGATCGG GATATGCCGA GCCTTATTTT TATGCTGCGC TTTCACGTTC TGCTATGGGG GATCACAAGG GCGCTCTCGT AGATTATACA AAAGCGATTG CCATTTCTCC CTCATACGCG GAAGCTTTTG CAGGCAGAGC GCTTGCGAAG ATCAGAAGCG GTGATTATCG CGGGGCTCTC GACGATTACG ATACGGTGAT AGGGCTGCAG TCTGATAATC CGGAACTTTA CTATAATCGG GCGCTGGTCA AGGTCAAGCT GTCTGACTAT CCGGGAGCTG AAATTGACTG TTCACTCGCT CTCGAACGGA ACAAGGTATA TGCCGAAGCT TTTTTTCTCA GGGGTATCGT TCGGAGTGAA CTTGGAAACC GCGAGGGTAT GCTTGCCGAT TTGCGTTTTT CTGCAGATGC AGGTTATGAG CCGGCAAAGA AGCTGCTGAA AAAAGAACGG GACAGGAGAT AG
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Protein sequence | MKTRILPFFL FFFVFVLPVV SAADDFDALF VQAGMKYRKG DFQGASALYT AVLSGNPRSA EAYNNRGLCK AASGDVTGAV ADYSEALKLD PSLAAASNNR GLAMAKIGKY HEAVLDYNQA LRINAVLPEV YNNLGLARIA LGDQSGALDD FNTALALKPF YPEALFNRGC ARQKLSEHRE ALRDFQQVIS FRSGYAEPYF YAALSRSAMG DHKGALVDYT KAIAISPSYA EAFAGRALAK IRSGDYRGAL DDYDTVIGLQ SDNPELYYNR ALVKVKLSDY PGAEIDCSLA LERNKVYAEA FFLRGIVRSE LGNREGMLAD LRFSADAGYE PAKKLLKKER DRR
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