| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0478 |
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| Symbol | |
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| ID | 6354473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 541170 |
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| End bp | 542201 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642668109 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001942550 |
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| Protein GI | 189346021 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTC GCATTCTCCC TTTTTTTCTC TTTTTTTTTG TATTTGTTCT CCCCGTTGTT
TCTGCTGCAG ACGACTTCGA TGCTCTGTTT GTGCAAGCCG GGATGAAATA CCGGAAAGGC
GATTTTCAGG GCGCATCGGC TCTGTATACT GCCGTGCTGA GCGGCAATCC GCGTTCTGCG
GAAGCGTATA ACAACCGCGG GCTCTGTAAA GCAGCTTCAG GAGATGTCAC CGGCGCTGTT
GCTGACTATT CCGAAGCCCT TAAACTCGAT CCGTCCCTGG CGGCGGCCTC CAATAACAGG
GGCCTCGCAA TGGCAAAGAT CGGGAAGTAT CATGAAGCTG TTCTCGATTA TAATCAGGCC
CTCCGTATCA ATGCCGTTCT GCCTGAAGTG TACAACAATC TCGGATTGGC CAGAATCGCA
TTGGGAGATC AATCAGGAGC ACTCGACGAT TTCAATACGG CCCTTGCGCT TAAACCTTTT
TATCCCGAAG CGCTTTTTAA CAGGGGGTGT GCCCGGCAGA AGCTGTCAGA ACACCGGGAA
GCTCTTCGGG ACTTTCAACA GGTCATATCC TTCAGATCGG GATATGCCGA GCCTTATTTT
TATGCTGCGC TTTCACGTTC TGCTATGGGG GATCACAAGG GCGCTCTCGT AGATTATACA
AAAGCGATTG CCATTTCTCC CTCATACGCG GAAGCTTTTG CAGGCAGAGC GCTTGCGAAG
ATCAGAAGCG GTGATTATCG CGGGGCTCTC GACGATTACG ATACGGTGAT AGGGCTGCAG
TCTGATAATC CGGAACTTTA CTATAATCGG GCGCTGGTCA AGGTCAAGCT GTCTGACTAT
CCGGGAGCTG AAATTGACTG TTCACTCGCT CTCGAACGGA ACAAGGTATA TGCCGAAGCT
TTTTTTCTCA GGGGTATCGT TCGGAGTGAA CTTGGAAACC GCGAGGGTAT GCTTGCCGAT
TTGCGTTTTT CTGCAGATGC AGGTTATGAG CCGGCAAAGA AGCTGCTGAA AAAAGAACGG
GACAGGAGAT AG
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| Protein sequence | MKTRILPFFL FFFVFVLPVV SAADDFDALF VQAGMKYRKG DFQGASALYT AVLSGNPRSA
EAYNNRGLCK AASGDVTGAV ADYSEALKLD PSLAAASNNR GLAMAKIGKY HEAVLDYNQA
LRINAVLPEV YNNLGLARIA LGDQSGALDD FNTALALKPF YPEALFNRGC ARQKLSEHRE
ALRDFQQVIS FRSGYAEPYF YAALSRSAMG DHKGALVDYT KAIAISPSYA EAFAGRALAK
IRSGDYRGAL DDYDTVIGLQ SDNPELYYNR ALVKVKLSDY PGAEIDCSLA LERNKVYAEA
FFLRGIVRSE LGNREGMLAD LRFSADAGYE PAKKLLKKER DRR
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