Gene Clim_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0454 
Symbol 
ID6354449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp514488 
End bp515141 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content57% 
IMG OID642668085 
Productprotein of unknown function DUF1003 
Protein accessionYP_001942526 
Protein GI189345997 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACC CGAGGCTTCG CAGGGCCATC ACCGTAAGAC CGGCCGTCTC CGAACTGATC 
CGCAGGGAAA CCGGCTCATG GGACGAAAAC GGCTGGATAT GCCTTGACGA CCTGCAGCTC 
TACCAGCACC GGTACATCCA GCAGCTGCTC GAAACCGAAA AAGGCGAACT CTCACAGCTC 
GATCACGATG TGCTCAGGGC AATGAAAGAG CAGGAACTGC TCTCGAAAAA TCCCGATATC 
GATTTCGATG CCGAACTCAC CTTCGGCCAG CGCCTGGCCG ACAGAATCGC CACGTTCGGC 
GGAAGCTGGT ACTTCATCAT CATCTTCGGG CTCTTCCTTT TCCTCTGGAT GGGCCTGAAC 
TCATGGCTGC TCGTCGCCCG GCCGTTCGAT CCCTACCCCT TCATCCTGCT CAACCTCGTA 
CTCTCCTCTC TGGCCGCCAT TCAGGCGCCG CTCATCATGA TGAGCCAGAA CCGGCAGGAA 
GCCCGCGACC GAGCCAGAGC AATCCACGAC TACCAGGTAA ACCTGAAAGC CGAGCTTGAA 
ATCCGTCAGC TTCACCAGAA AATAGACCAC CTGCTCTCCC GCCAGTGGGA ACGACTGGTC 
GAAATTCAGG AGATACAGAT GGAGCTTATC AATGACATCC GCAACCGGAA ATAG
 
Protein sequence
MQYPRLRRAI TVRPAVSELI RRETGSWDEN GWICLDDLQL YQHRYIQQLL ETEKGELSQL 
DHDVLRAMKE QELLSKNPDI DFDAELTFGQ RLADRIATFG GSWYFIIIFG LFLFLWMGLN 
SWLLVARPFD PYPFILLNLV LSSLAAIQAP LIMMSQNRQE ARDRARAIHD YQVNLKAELE 
IRQLHQKIDH LLSRQWERLV EIQEIQMELI NDIRNRK