Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0415 |
Symbol | |
ID | 6354410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 460520 |
End bp | 461167 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642668046 |
Product | protein of unknown function DUF477 |
Protein accession | YP_001942487 |
Protein GI | 189345958 |
COG category | [S] Function unknown |
COG ID | [COG3762] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGATC CGGTAAACAG GTTCCTGACC GAGAAAGAGC TCCGATGTAT CGAAGAGCGA ATTCGTGAGG CAGAAAAAAC AACATCCGGA GAGATCGTCG TAAAGATTGT CTCTTCAAGC GACAGTTATG CCGCGGCGGG GCTGCTCGGC AGTTCAATAA TCTCGCTGCC TGGCGCCATC CTTATCATGA TAGCTCTTCA AAGCCGGGAT ATGTGGATGT TTCTCGGGAT TTTCGCTGCA CTCTTTATGG TGCTCAACGA GCTTTTTACA AGAGTTCCCA CGCTTAAGCG TCCGTTCGTA TCGGCTTCCG ACAGGCAGCG GGAAGTCGAA GAGGGGGCTC TCGGCGCCTT TTTTCGTCGC GGCATCAATG ATACAATCGA TCATACCGGT ATTCTTCTCT ACATCTCTCT TTTCGAGCAC AAGGTTCGGG TTGTTGCCGA CAAAGGCATC AGTGAAAAGG TCGATCAGGA GGTTTGGCAG GCAATTGTCG ATATCATTAT CTCCGGCATT CATGAAAAAC GGCAGGGGAC GGCTGTTGCT GCTGCAGTTG ACCGGTGCGG TCAGATTCTT GCCCGGCATT TTCCTGTCAA ACCCGGAGAC CGCAACGAGC TTGCCGATAC GATTATCATG GGAACGGCCA TCCGATAA
|
Protein sequence | MKDPVNRFLT EKELRCIEER IREAEKTTSG EIVVKIVSSS DSYAAAGLLG SSIISLPGAI LIMIALQSRD MWMFLGIFAA LFMVLNELFT RVPTLKRPFV SASDRQREVE EGALGAFFRR GINDTIDHTG ILLYISLFEH KVRVVADKGI SEKVDQEVWQ AIVDIIISGI HEKRQGTAVA AAVDRCGQIL ARHFPVKPGD RNELADTIIM GTAIR
|
| |