Gene Clim_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0404 
SymbolthyX 
ID6354399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp444104 
End bp444757 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID642668035 
ProductFAD-dependent thymidylate synthase 
Protein accessionYP_001942476 
Protein GI189345947 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1351] Predicted alternative thymidylate synthase 
TIGRFAM ID[TIGR02170] thymidylate synthase, flavin-dependent 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTTC GTCTCATCGC GGTAACCACG CCTTGTTTCG AGGCAGAAAA CCACCCGATT 
ACCACCGCTG AAGGGCTTAT GGCCTATTGC GCAAGGGTTT CCAGTCCCCA TCAGGAAAAT 
CTCGACTACG AAAAACTGCT CGCCTACTGC ATCGCAAACA AACACTGGAG CATTTTCGAA 
ATGGCGGATA TGACTGTGGA AATAGTCACT TCACGAGCGA TAGCTCCCCA GATTCTGCGA 
CACAGAAGCT TCCAGTTTCA GGAGTTCTCC CAGCGATATG CAAAAGCACA GGCTGTCGAG 
AAATACCTGC CCCGCAGGCA GGACAGCAAA AACCGGCAGA ACTCGCTTGA CGATCTCGAT 
GATCGAACCA TCGCATGGTT CAACGAAGCA CAGAACGAAA TTGCCCGCCT GTCGATGGAC 
AGGTACAATG ACGCCATTGA AAAAGGAATC GCGAAGGAAT GTGCACGGGT ACTGCTCCCG 
CTGGGAACCA GGACGAAACT GTACATGAAA GGATCGGTAC GAAGCTGGAT ACACTACCTT 
GAAGTGCGAA CCGACAGCAG CACACAGAAG GAGCATCGCG ATATTGCCGC AGAGATCAAA 
TCCATTTTCT GCACACAATT TCCGGCAACG GCCGGTGCTC TCGGATGGAT GTAA
 
Protein sequence
MQVRLIAVTT PCFEAENHPI TTAEGLMAYC ARVSSPHQEN LDYEKLLAYC IANKHWSIFE 
MADMTVEIVT SRAIAPQILR HRSFQFQEFS QRYAKAQAVE KYLPRRQDSK NRQNSLDDLD 
DRTIAWFNEA QNEIARLSMD RYNDAIEKGI AKECARVLLP LGTRTKLYMK GSVRSWIHYL 
EVRTDSSTQK EHRDIAAEIK SIFCTQFPAT AGALGWM