| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0393 |
|---|
| Symbol | |
|---|
| ID | 6354388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 432350 |
|---|
| End bp | 433606 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642668024 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001942465 |
|---|
| Protein GI | 189345936 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTATC TGGTTTTTGA GGATGAAAAG GTTTCCGGGT TGAAACCACT GGTTAACTTC
AAGCCCGCTT ACGGCCTCTA TACCGGGTTC CGCTCTCTGG CGCAGAAGCT TGAAGATTCG
ATTGCCGAAA GGGTCAGGCT GACCTGGCAC CTCAGAGCCT ATCTTGCGCC GTTTTACCGT
GAACGGCATC CGGAGAGAAC AGTTAACAGT ATAGAGCAGG ATGAACTTTT TCTTGTAAAC
GGCAGATTGC TTTGCGATGA AAAATCAGCG GAAATCATCG CTCAAGGTGC TCTGGACCCG
GGCAATGCGT TGATGCAGGG TGACGATCTG CTTTTTGCCC GTCTGCACCG CAGCCGGTTA
TCGGATTTGC CTGACGGGAA ACTTCCGGAT CTTCTGGATT CAGGGTTACT GGCGGCAGGG
CTCGCCGTTC AGCAGGTCAG CGGATTTCGG CTTATCGGGA ACGTCTGGGA TGTAATGGCT
TATCATACCG GGGAGATGGA GCGGGATGCC GAACGGCTTG AACCAGGGAG TATTGACGGC
GATATCCATC CTTCAGCGGT TATAGTTAAC CGTTCCAATA TAGTTATCGC TCCCGGCGCC
ATCGTAAAGG CAGGGGCAGT GCTCGATGCG GAGGATGGTT TTATCGCTGT CGGCCCGGGA
GCTGTTGTTG AGTCTCAGGC GGTTCTGATG CAGAATGTTT TTCTCTCTCC CTGTTCGCGC
GTAAAAGCCG GATCGAGAGT ATACAGTAAT GTATTTGTGG GTACGGCATC AAAAGTTGGC
GGAGAGGTTG AGGACTCTTT GATCGAACCT TTTGCCAATA AACAGCATGA TGGTTTTCTC
GGGCATTCCT ATATTTCTTC GTGGTGTAAT CTTGGAGCGG GGACCAATAC TTCCGATCTT
AAAAATAATT ACAGTAATGT CAAGCTATTG ATCGACGGGT GTGACGTTTC CACCGGATTG
CAGTTTCTGG GGCTTCTCAT GGGAGACCAT GCGAAATGTT CGATTAATTC GATGTTCAAT
ACCGGGACGA TTGTCGGTAC CGGAGCAAAT GTTTTCGGTG GAGGTTTTCC TCCCAAAGAT
GTCGCACCAT TTACCTGGGG CAGCGCGGCA GAAGGGTTCG AGCCCTATCT GATCGAAAAA
GCGGTGGAAA CGGCCCGAAA GGTTATGGAG CGCCGGCAGG TGGCCATGAG CAGCGCCTAT
GAAACCATGT TCCGTTTTGT CGCTGCCAGA GAGCATGGCC GGAAGTGTTT TATTTAA
|
|---|
| Protein sequence | MQYLVFEDEK VSGLKPLVNF KPAYGLYTGF RSLAQKLEDS IAERVRLTWH LRAYLAPFYR
ERHPERTVNS IEQDELFLVN GRLLCDEKSA EIIAQGALDP GNALMQGDDL LFARLHRSRL
SDLPDGKLPD LLDSGLLAAG LAVQQVSGFR LIGNVWDVMA YHTGEMERDA ERLEPGSIDG
DIHPSAVIVN RSNIVIAPGA IVKAGAVLDA EDGFIAVGPG AVVESQAVLM QNVFLSPCSR
VKAGSRVYSN VFVGTASKVG GEVEDSLIEP FANKQHDGFL GHSYISSWCN LGAGTNTSDL
KNNYSNVKLL IDGCDVSTGL QFLGLLMGDH AKCSINSMFN TGTIVGTGAN VFGGGFPPKD
VAPFTWGSAA EGFEPYLIEK AVETARKVME RRQVAMSSAY ETMFRFVAAR EHGRKCFI
|
|---|
| |