| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0352 |
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| Symbol | |
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| ID | 6354346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 389931 |
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| End bp | 391307 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642667982 |
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| Product | RNA modification enzyme, MiaB family |
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| Protein accession | YP_001942424 |
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| Protein GI | 189345895 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.135679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGACG CTCTGTATGC AAAGAGATCG CCGAGTGTTG CCGCCGTAAC GATGGGATGC
AAGCTGAATT ATTCCGAAAC ATCAGCAATA CTCGATCGGC TTTCTGCCGA AGGGTGGAAA
CTCTCCTCTC TCGATGCAGG TGCGGATATG ATTATTATTC ATACCTGTTC AGTGACAAGT
CAGGCTGAAC AGAAATGCAG GCAGAAAATA AGGCGAATCA TTCGCAGGCA TCCGGAAAGC
GTTGTCGTCG TTATTGGCTG TTATGCGCAG CTGCAGCCGG CACTGCTTGC CGGTATCAAG
GGTGTTGCTG CTGTTCTGGG AAGCAGCGAC AAATTCGTGA CCGCTACCTA TCGGGAGCTT
CTGGATCAAA AACAGACATT CCCTCTTGCG CGAGTCTCGG ATATCGGCAG TACGGAGACG
GTTTTTCCGG GATATTCTCT TTCTGTAGAT GAGGGAGAAG CGCGGACAAG AGCTTTTTTG
AAAATTCAGG ATGGTTGCGA CTACGCTTGC GCATATTGCA CCATTCCGCA TGCACGAGGT
CGTTCCCGTT CACTTCCGTC CGAAGAGCTT GTTGCCCGTG CCCGCAGTCT TGCTTTTTCC
GGGTATCGTG AAATCGTTCT GACCGGGGTG AACATCGGCG ATTATCGCGG CCATGCATCC
GGACTCGTCG GTCTTTTACG GATGCTTGAA GATGTTTCTG TCGATCGTAT CAGGATCAGC
TCCCTTGAAC CGGATATTCT CGATGACGAA TTGATCGAAA CCGTAGCGGC ATCGAAAAAA
ATCACTCCGC ATTTCCATGT GCCGCTCCAG AGCGGATCCG ATTCCATATT GAAGGCCATG
CGTCGGAGGT ACACCACGGA ATCCTATCGG GAGAAACTTG TCCGTGCTGT TGGCGCTATT
TCCGATTGCG CAATCGGTGC GGATGTCATT GCCGGCTATC CCGGAGAGAG TGAAGAAGAT
TTCATGCAGA TGTACCGATT TATCGAGGGG CTGCCGATAG CCTATCTGCA TGTTTTCACC
TGTTCTGTTC GTCCTGGTAC CGTACTCGCA GCACAGCTTG CTGCCGATGA ACGCCGGTTA
CCATCGCCCG TGGAGCTTGA CAGAAGAAGT CGCCTGCTTA TAGAACTCGG AAAACGCAAG
ACGGAGGAGT ATTCAGGAAA ATTTATCGGG AGAGAGTGCG AGATTCTCGT TGAAGCGTCT
CTTCGCGAAA AGAGCGGAAG ACTGGTTTGC AGCGGCTATA CCGCTCATTA TCTTCATGTC
ACGGCAGAAG CGGGCTGTTT TGAAGGAAAT ACGGCGGATC TTAAGGGTCG CCTGTTGCCG
GTTCGCATTG CTCATATGGA CGACGATTTG AATTTACATG GCAGACTGTT ATTTTAA
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| Protein sequence | MDDALYAKRS PSVAAVTMGC KLNYSETSAI LDRLSAEGWK LSSLDAGADM IIIHTCSVTS
QAEQKCRQKI RRIIRRHPES VVVVIGCYAQ LQPALLAGIK GVAAVLGSSD KFVTATYREL
LDQKQTFPLA RVSDIGSTET VFPGYSLSVD EGEARTRAFL KIQDGCDYAC AYCTIPHARG
RSRSLPSEEL VARARSLAFS GYREIVLTGV NIGDYRGHAS GLVGLLRMLE DVSVDRIRIS
SLEPDILDDE LIETVAASKK ITPHFHVPLQ SGSDSILKAM RRRYTTESYR EKLVRAVGAI
SDCAIGADVI AGYPGESEED FMQMYRFIEG LPIAYLHVFT CSVRPGTVLA AQLAADERRL
PSPVELDRRS RLLIELGKRK TEEYSGKFIG RECEILVEAS LREKSGRLVC SGYTAHYLHV
TAEAGCFEGN TADLKGRLLP VRIAHMDDDL NLHGRLLF
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