| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0349 |
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| Symbol | rpsA |
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| ID | 6354343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 385593 |
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| End bp | 387353 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642667979 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001942421 |
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| Protein GI | 189345892 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000135822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAA CACTATCGCT GGAGAAGAAA GTCCAGGAAA GGCCCGCAAG GAAAAAAGTC
AAAGTTTTCG CTCACTACGA TTCCGCGGCA CTTGCCGAGA TGGAAAAGCT CTATACGAGT
ACGCTGAGCG AAATCAGGGA AGACGAGATC GTCAAGGGCC GTATCGTCTC CATTTCCAAC
AAGGACGTCA CCATTGACGT CGGTTACAAG TCAGAGGGTA TTGTCTCACT GCTTGAATTC
CGTGACGAAG AAGAGGGAGA AGTCAAGGTT GGCGATGAAG TAGAGGTTTA TCTCGAAAAC
ATCGAAGACA AAATGGGGCA GCTCATTCTT TCCAAGAAGA AAGCTGACGT TCTGAGAATC
TGGGACAAGA TCTACGATTC AATTGAAAAC GACACGATCA TCAACGGCAA GATCATCAAC
CGCGTCAAGG GCGGTATGAC TGTCTCCCTG TCCGGTGTTG AAGCCTTCCT TCCCGGTTCG
CAGATCGATG TCAAGCCTGT TCGTGATTTC GATGCCCTGG TCGGTCAGAC TATGGATTTC
AGGGTTGTCA AAATCAATCC CGTTACTCAG AATATTGTTG TCAGTCACAA GGTCATCCTC
GAAGAGGAGT ATGCAGCACG CCGTGAAGAG ATGCTTGCCA ATATCAAGGT TGGTATGGTG
CTCGAAGGTA CGGTCAAAAA TATCACCGAC TTCGGTATTT TTGTCGATCT TGGCGGTCTC
GACGGTCTGG TGCATATCAC CGATATTACC TGGGGCAGAA TCAACCATCC GTCGGAAGTC
GTCGAACTTG ATCAGCCGAT CAAGGTTGTT GTTGTCGGCT TCGATGAGAA CACCAAGCGT
GTCTCTCTCG GCATGAAGCA GCTTGAGTCT CATCCGTGGG AAAACATCGA ACTTAAATAT
CCTGTCGGAT CCAAAGCGAA CGGCCGTGTG GTTTCCATTA CCGATTACGG CGCATTTGTC
GAGATCGAGA AAGGTATTGA GGGACTTGTC CACATTTCCG AAATGAGCTG GACGCAGCAC
ATCAAACATC CGGGTCAGTT CGTTACTCTC GGTCAGGAGG TTGAGTGTGT GATTCTCAAT
ATCGATAAAG AGCACACCAA GCTTTCGCTC TCCATGAAAC GGGTGAACGA AGACCCCTGG
ATCGCGCTTT CAGAAAAATA TATCGAGAAT TCATTGCATA AAGGCACGGT CAGCAACATC
ACCGATTTTG GTGTATTTGT TGAGCTTGAA GCCGGAGTTG ACGGTCTGGT GCACATCTCC
GATCTGTCAT GGACGAAGAA AATCCGCCAT CCGAGCGAAC TGGTCAAGAA AAACCAGGAA
CTGGAAGTCA AGGTGCTGAA ATTTGACGTC AATGCTCGCC GTATCGCTCT CGGTCACAAG
CAGATCAATC CTGATCCGTG GGATGAGTTC GAGCAGAAGT ATGCCGTAGG CGCCGAAACT
CCGGGAAATA TCTCACAGAT CATCGAGAAG GGTGTCATTG TCATTCTGCC CGGCGATGTT
GACGGTTTTG TGCCGGTATC GCATCTGCTT CAGGGCGGCG TGAAGGATAT TCACTCCTCG
TTCGCTGTGG ATAATGAACT TCCGCTTCGC GTGATCGAGT TCGACAAAGA GAACAAAAGG
ATCATTCTTT CGGCTCTCGA ATATTTCAAG GACAAGAGCA AGGAGGAGAT CGAAGCATAT
CTTCAGGCTC ATCCGAACGA AAAGAAAGAG ATCGAGGATG CTACCGCAGA GCTGGAGCCT
CAGCCGAAAG GCAGCAAGTA A
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| Protein sequence | MPETLSLEKK VQERPARKKV KVFAHYDSAA LAEMEKLYTS TLSEIREDEI VKGRIVSISN
KDVTIDVGYK SEGIVSLLEF RDEEEGEVKV GDEVEVYLEN IEDKMGQLIL SKKKADVLRI
WDKIYDSIEN DTIINGKIIN RVKGGMTVSL SGVEAFLPGS QIDVKPVRDF DALVGQTMDF
RVVKINPVTQ NIVVSHKVIL EEEYAARREE MLANIKVGMV LEGTVKNITD FGIFVDLGGL
DGLVHITDIT WGRINHPSEV VELDQPIKVV VVGFDENTKR VSLGMKQLES HPWENIELKY
PVGSKANGRV VSITDYGAFV EIEKGIEGLV HISEMSWTQH IKHPGQFVTL GQEVECVILN
IDKEHTKLSL SMKRVNEDPW IALSEKYIEN SLHKGTVSNI TDFGVFVELE AGVDGLVHIS
DLSWTKKIRH PSELVKKNQE LEVKVLKFDV NARRIALGHK QINPDPWDEF EQKYAVGAET
PGNISQIIEK GVIVILPGDV DGFVPVSHLL QGGVKDIHSS FAVDNELPLR VIEFDKENKR
IILSALEYFK DKSKEEIEAY LQAHPNEKKE IEDATAELEP QPKGSK
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