| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0345 |
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| Symbol | ispH |
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| ID | 6354339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 381651 |
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| End bp | 382625 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642667975 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001942417 |
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| Protein GI | 189345888 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAATAA ACCTCGACAG AACATCTTCC GGGTTCTGCA TCGGCGTACA GGGAACCATC
CACGTAGCTG AAGAGAAACT CGCTGCAAAG GAAACACTGT TCTCGCTCGG TGATGTCGTC
CACAATGAAG TGGAGGTAAA ACGGCTTGAA AACCTCGGAC TTACCACCAT CGACGAAGCT
GTCTTCAAAG AGCTTCAGAA CACCAGCGTG CTCATCAGGG CTCACGGCGA ACCTCCGGAA
ACCTATGCCA CGGCAGAGCG GAACAAGCTC GATATTACCG ATACCACCTG CCCGGTCGTT
TCAAAACTGC AGCGGACTGC CCGGCTTCTC TGTCAGCTCG GTTATCAGGT CATCATTTAC
GGCAAACATA CCCACCCCGA AGTCATCGGC ATCAACGGTC ACTGCAGCAA CCGGGCGGTC
ATCATCAAAC ATGCCGATCT CTCGGATCCT GAAGAGCTGA AAACACTCGA TACTACCATA
AAAACCGCGC TTATCTCACA GACAACCATG GATGTGCCTG GTTTTTACGA ACTGAAAACC
AATCTTGAAA AACGGTTCGC GGAATCGGAT GAGACCGCCG GAAAACCCTG GACAGCAATC
CGCGATATTG ACATAACCGC TGCAATGACC GGTATCGGTA CGATGCCCCG AACTGTTTTC
AAAGACACCA TCTGCCGTCA GGTATCGAGC CGGAACAAGA AGCTTCACGA CTTCGCGCTG
GCAAACAGCT GTGTCATTTT CGTTGCCGGC AGAAAAAGCT CCAACGGCCA GGTGCTCTTC
GGCATCTGCC GCTCTGCCAA TCCCAGAAGT TATTTTATCG AAGATATCGA AGACCTCGAG
GATTCCTGGT TCAGGGACAA CGAAGGCTCT CCTGTCGAAA GTATCGGTAT CTGCGGAGCC
ACCTCCACGC CGATGTGGCT TCTTGAAAAA GTCGCCGAAT TCATCGACGG ACGTTTTAAC
CATCGAGATG CATGA
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| Protein sequence | MKINLDRTSS GFCIGVQGTI HVAEEKLAAK ETLFSLGDVV HNEVEVKRLE NLGLTTIDEA
VFKELQNTSV LIRAHGEPPE TYATAERNKL DITDTTCPVV SKLQRTARLL CQLGYQVIIY
GKHTHPEVIG INGHCSNRAV IIKHADLSDP EELKTLDTTI KTALISQTTM DVPGFYELKT
NLEKRFAESD ETAGKPWTAI RDIDITAAMT GIGTMPRTVF KDTICRQVSS RNKKLHDFAL
ANSCVIFVAG RKSSNGQVLF GICRSANPRS YFIEDIEDLE DSWFRDNEGS PVESIGICGA
TSTPMWLLEK VAEFIDGRFN HRDA
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