Gene Clim_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0319 
Symbol 
ID6353836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp353511 
End bp354989 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content54% 
IMG OID642667948 
Productphosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 
Protein accessionYP_001942392 
Protein GI189345863 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTT TTTATTATAT TGCATCAGTT TTTTTCAACT TCAAGGCAGT TCCCATGAGC 
TTGATGATCA GCGTATCCGG TATCAGAGGC GTAGTCGGTG AAAGCCTCAC CCCTAAAAAC
CTCACGGCAT TCGCATCGGC ATTTGCGACG TGGATACACC GTTCAAGAGA GAACAGCGTC
AAGAGCCGCG GAAATGGACT GCCGCTTATT GTCATCGGAA GCGATACGCG TCCGACAGGG
AAACAGATTG CCGGACTTGT CGGCAATGTT CTTGCGCTCT CGGGCTGCGA TGTTCTGGAT
CTCGGCATAG CGACAACGCC GACCGTTGAG TTGGCTACCG CTGCCGCAAA GGCTGACGGC
GGACTGATCA TCACTGCGTC GCACAATCCG GTGGAATGGA ATGCCCTGAA AATGCTGAAC
CATCGCGGTG AATTCCTGTC AGCAGAAGAG GTGGATCAGC TGCTTGCGAT TGCCGAAGAG
GAGACATTCC ATTCGGCCCG CTGGAATGAA ATCGGCAGAC TGACCCTCAG TAAGGGCTAC
GACAGCGAAC ATATCGACAG CATCCTGAAA ATGCCCTTCA TCGATCCTGC CGCTATTGAA
AAAGAGCAGT TCAAGGTACT CGTCGATTGC GTGGAGGGAG CCGGCTTTAG CATAGTACCG
GAGCTCTGCA GACGTCTCGG CATCGGGAAT CTGACGCTTG CCGCATGTGA AGGCACCGGT
ATCTTTCCCC GCAATCCGGA ACCGGTTGAA GAGAACCTCA CCGAAACCAT AGCACTCATG
AAGCGCTCAG GATGCGATTT CGGCATCATT GTCGATCCCG ATGTCGATCG TCTTGCGCTC
ATCGCCGAAG ACGGGTCGCT CTTTGGAGAA GAGTACAGCC TGGTTGCCTG TGCCGATTTT
TACCTCGGCA TCAAAAAAGG AGCGGTAGTC AATAATCTTT CCAGCAGCCG GGCACTTGCC
GACATAGCAG GCTGGCACGG TGTGCCCTGC TATAGCGCAA AGGTAGGCGA AGCCAACGTT
ACGGCAATGA TGAAGGAGGT CGGCGCGACA ATAGGCGGCG AAGGAAACGG CGGCATCATT
CTGCCCGAGC TGCATTACGG ACGGGATGCC CTTGTCGGAA TAGCCCTGTT TGTGCAGGCA
TTCACCAATT GGCGCTCGGA CAACAGGGGA GGAACCCTCT CGGAGTTCAG GAGCCGGTTT
CCGGACTATG CCATGGCAAA AGAAAAGATC CGCCTTGGTG CATCGACTCC GGAAAAACTC
GATATCCTGT TTTGTAACAT TGCAAAACTC TATCCCGAAG CGAAGGCAAA CCGCCTCGAC
GGTCTGAAAC TTGATTTTGC CGATAGCTGG GCTCATTTAC GCCCGTCGAA TACCGAACCC
ATCATCAGAA TCTACACCGA AGCCCCGGCA AGAGAGCATG CCGAACGGTT GGCATCCGAA
ATGATGCAGC ATATCGCAGC CGGAACGGCC GTTTCTTGA
 
Protein sequence
MAGFYYIASV FFNFKAVPMS LMISVSGIRG VVGESLTPKN LTAFASAFAT WIHRSRENSV 
KSRGNGLPLI VIGSDTRPTG KQIAGLVGNV LALSGCDVLD LGIATTPTVE LATAAAKADG
GLIITASHNP VEWNALKMLN HRGEFLSAEE VDQLLAIAEE ETFHSARWNE IGRLTLSKGY
DSEHIDSILK MPFIDPAAIE KEQFKVLVDC VEGAGFSIVP ELCRRLGIGN LTLAACEGTG
IFPRNPEPVE ENLTETIALM KRSGCDFGII VDPDVDRLAL IAEDGSLFGE EYSLVACADF
YLGIKKGAVV NNLSSSRALA DIAGWHGVPC YSAKVGEANV TAMMKEVGAT IGGEGNGGII
LPELHYGRDA LVGIALFVQA FTNWRSDNRG GTLSEFRSRF PDYAMAKEKI RLGASTPEKL
DILFCNIAKL YPEAKANRLD GLKLDFADSW AHLRPSNTEP IIRIYTEAPA REHAERLASE
MMQHIAAGTA VS