| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0316 |
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| Symbol | |
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| ID | 6353833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 349092 |
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| End bp | 350174 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642667945 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_001942389 |
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| Protein GI | 189345860 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACT CACTTTCCAA TATAACAATA GAACGGAAGC ATAACCATGT AGAGATCTGC
CTGCATGAAG CTGTCGGGTT CGACAGAAAA AGTGCCGGCT TCGATGAGAT CGAGTTCATA
CACAACGCTC TTCCTGAAAT CCGTTTTTCC GATATCGACC TTTCAACGAC CTTTCTGGGT
CGGAAAATCG GCGCGCCTCT CATGATCTCT TCCATGACCG GGGGCTTCGA GAAAGCATCG
TTGCTCAATC GTCGTTTTGC CGAAGCTGCA GAACATTTCG GTATTCCGCT CGGCATCGGC
AGCATGAGGC AGGCTCTTGA AAACAGCACC CAGAAAGAGA GTTTCGCGAT TGTCAGAAAA
TACGCTCCGT CCGTACCGGT TTTTGCCAAT ATAGGGGCGC CTGAAGTCGC CCGGGGTTTA
AGCGCATCGG ATATCGGCAT CCTTCTTGAA CTGATCGAAG CCGATGCGCT CATTGTGCAC
CTGAATGCGG CACAGGAGCT GTTTCAGCCG GAGGGAAACA CGGATTTCCG TCATGTACTC
GATCAGCTGT CGCACTTGTG CGCAACCGTT CCGGTTCCGG TTATTGTAAA AGAGGTCGGC
TGCGGCATAT CCGGAGTATG CGCGCAAAGA GTGCTCGATG CGGGAGTGAA GGTTATCGAT
GTAGCCGGAG CCGGCGGCAT CAGCTGGCAG AAAGTGGAAG AAATCCGATA TGTGCGGCAA
AGAGAGCGGG AAAACCGCTT CAGTCCGGAA GCTCTCGATG ATCTGCTGAA CTGGGGAATC
CCCACAGCAA GGTGTATCGC AGAGGTTTCC GACCTCAAAA AACATACCGT CCATACGGAT
TTCGAAATCA TCGCTTCCGG AGGAATACGA AGCGGACTGG ATATTGCCAA ATCGCTGGCT
CTTGGCGCCC GGATTGGAGC ATCTGCCGGA CAGCTTCTCA ATGCGGCACA CGAAGAGCGG
CTTGAAGAGA CGATAGAAAC CTGGCTCAAC GATCTCAGGG CCGTCCTGTT CCTGACAGGA
ACGACGTCAC CCGACAAGCT TCAGAAACAG CATCTTATTC TTAAACATCG ACCGATTTTG
TAA
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| Protein sequence | MSDSLSNITI ERKHNHVEIC LHEAVGFDRK SAGFDEIEFI HNALPEIRFS DIDLSTTFLG
RKIGAPLMIS SMTGGFEKAS LLNRRFAEAA EHFGIPLGIG SMRQALENST QKESFAIVRK
YAPSVPVFAN IGAPEVARGL SASDIGILLE LIEADALIVH LNAAQELFQP EGNTDFRHVL
DQLSHLCATV PVPVIVKEVG CGISGVCAQR VLDAGVKVID VAGAGGISWQ KVEEIRYVRQ
RERENRFSPE ALDDLLNWGI PTARCIAEVS DLKKHTVHTD FEIIASGGIR SGLDIAKSLA
LGARIGASAG QLLNAAHEER LEETIETWLN DLRAVLFLTG TTSPDKLQKQ HLILKHRPIL
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