Gene Clim_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0281 
Symbol 
ID6353798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp319655 
End bp320701 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content49% 
IMG OID642667910 
Productglycosyl transferase family 9 
Protein accessionYP_001942354 
Protein GI189345825 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA AAGACTGGAA AAAACAACGC AGATTCCGTC AGGGTTTCGC CTCTCTGCTG 
CAGAAAATAC TGAAAAAACC CCTGCAGCAG ACACCATATA CCGGTCCGTT GCACTCCGTC
GTCATCCTCG CTCAGGAAAA ATATGGCGAC GCTATTCTTC TGACGCCTCT CCTGAAACAG
CTGAAGCAGC AATTTCCTGC AATAGCGATC CATGTCGTTA CCTTCAGTAA AGCTACCTAC
GAATTTTTCC GGTCCGACCG GCATATAGAC ACCCTCCATT GTACAAAAGG CAATGTATGG
AACTATTACC GCCAGATGCT GACGAAACGG TTCGACCTGC TCTTTAACAC CAAGGACCAC
CCGTCAACAA GCTTCATACT CCAGTCCATC ATTATCCGGG CTTACCGTAA GGCTGGCATC
GACTGCGAGT ATCACCGGGG CATCTACGAT TACCTTGTCG ATCTCGATTT CCACACACAG
ATAGCTTTGA AAAACTGCGG ACTGCTTTCC ATTCTTGGAA AACCTGTCCT CAGCGATATG
TGCAGACCCT ACATTCCACC AATGCCGGTC TCTCCTGCGA TTCTGCAATT CATCACGTCG
TTATCGGACC GGCCGTGTAT TGGCATCAAC ATCAGTGCAG GAGGGGCAAC ACGATACTGG
ACGGAAGAAA ACTGGCTAAA ACTGACGAGG GCATTTCCTG AGAGACAATT TCTTGTTCTT
TCCGCACCAA CGGAACGTGA ACAGAAAGCA AGGCTTGAAC GGCACTGCCC GAATATTATT
CCCTCTCCTG AAACCGCAAA TCTGTATGAA ACAAATCTGA TCGTCGGAAA AACTGTCCTG
CTGGTTACGC CGGATACCGC CATGGTTCAT GTTGCGTCCT GTTCAGGAAT TCCTGTAATC
GGCCTATACG GTATTGCAGC GCAGGACCAG AGCCGCTTCA GACCGTTTCT TGTAACACAC
AGAATGTTGA TCTCACCTAC AGCCCTCGTA AAAGATATTA CTGCGGAACA TGTTATCGTG
GAGTTGAATT TACTGCTGGG CAAATGA
 
Protein sequence
MSEKDWKKQR RFRQGFASLL QKILKKPLQQ TPYTGPLHSV VILAQEKYGD AILLTPLLKQ 
LKQQFPAIAI HVVTFSKATY EFFRSDRHID TLHCTKGNVW NYYRQMLTKR FDLLFNTKDH
PSTSFILQSI IIRAYRKAGI DCEYHRGIYD YLVDLDFHTQ IALKNCGLLS ILGKPVLSDM
CRPYIPPMPV SPAILQFITS LSDRPCIGIN ISAGGATRYW TEENWLKLTR AFPERQFLVL
SAPTEREQKA RLERHCPNII PSPETANLYE TNLIVGKTVL LVTPDTAMVH VASCSGIPVI
GLYGIAAQDQ SRFRPFLVTH RMLISPTALV KDITAEHVIV ELNLLLGK