Gene Clim_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0279 
Symbol 
ID6353796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp316964 
End bp318121 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content35% 
IMG OID642667908 
Productglycosyl transferase group 1 
Protein accessionYP_001942352 
Protein GI189345823 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.887437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA ATATACCACG CATATTGCAT ATATCGCCTA CCTGGCTTCC TCTTACTCAA 
ACCTGGCTTT ATAATCAGGT AAACCAGCTC CAGAAGCAAA TGCCATATAT ATCTGTCGGA
TGCGAAAAGA TCGAAAACAG CATGAATTTT CCTATACAAA ACCTATACTG CTTCAGAGAT
CAAAATCAAC TAACAAGAAA AATTGACGAA AGAATACGGA AAATAGGATT AAGAAAACAT
CTTGACTTTT ATGTAAAAAT CGGGAAAAAA CAAAAAACAA ATATAATCCA CTCTCATTTT
GGGAATATTG GGTGGAAAAA TATCGGTATT TCTGAAAAAC TAAACGTACG ACACATTGTA
ACTTTTTATG GCAGAGATGT GAATCATTTA CCAGTAGCAC ATCCTCGCTG GAAAATTCGA
TATAAAGAAC TTTTTAAAAA AGCAGACCTT TTTTTATGCG AAGGGCCATA CATGGCAAAT
TCACTCCTTA ACCTTGGATG CCCAAAAGAT AAAATAGAAA TCCTGCGCCT TGGAGTAAAT
ATTAGCGACT TGACTTATAG ACCAAGAATA ATACATCCTG ATAAGCCTAT AAAAATATTA
ATTGCAGCCT CATTTAAGGA AAAAAAAGGA ATCCCTTACG CAATTGATGC TATAGGCCTC
TTAAGCAGGA AATATAAAAT AGAATTGACT ATTATAGGTG ATGCCCCGGA GCTTGACAAA
GAGAAACTAA AAATAATAAA AGCGATACAC GATAATAACT TAACGAAAAA AACCAAATTT
CTCGGTTATG TATCTCATTC TGAAATGTTA CAGGAAAGTT ATAAACATCA ACTTTTCGTT
CAACCAAGCA TCACTGCAAA CGATGGAGAT ACTGAGGGAG GTGCGCCTGT TAGTATTATC
GAAATGCTTG CATCCGGCAT GCCTGTTATC AGCACAAAGC ACTGCGATAT ACCAGATATC
GTACCTCAGG AACTCAATCA CTTGCTCGCG CCTGAAAAAG ATACTGAAAA GCTCTATCAA
TGTATGGAAC ATCTTATAAA TATGCATGAA AACATAATTG ATATATGCGA TATTTCAAGA
GCATATATCG AAAAAAGACA TAATATAGTA TCCCAAACAA CAAAGCTTCA AAATATTTAC
GATAACATCT GTCGATAA
 
Protein sequence
MKENIPRILH ISPTWLPLTQ TWLYNQVNQL QKQMPYISVG CEKIENSMNF PIQNLYCFRD 
QNQLTRKIDE RIRKIGLRKH LDFYVKIGKK QKTNIIHSHF GNIGWKNIGI SEKLNVRHIV
TFYGRDVNHL PVAHPRWKIR YKELFKKADL FLCEGPYMAN SLLNLGCPKD KIEILRLGVN
ISDLTYRPRI IHPDKPIKIL IAASFKEKKG IPYAIDAIGL LSRKYKIELT IIGDAPELDK
EKLKIIKAIH DNNLTKKTKF LGYVSHSEML QESYKHQLFV QPSITANDGD TEGGAPVSII
EMLASGMPVI STKHCDIPDI VPQELNHLLA PEKDTEKLYQ CMEHLINMHE NIIDICDISR
AYIEKRHNIV SQTTKLQNIY DNICR