Gene Clim_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0246 
Symbol 
ID6354703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp277730 
End bp278992 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content56% 
IMG OID642667875 
Producthypothetical protein 
Protein accessionYP_001942320 
Protein GI189345791 
COG category[R] General function prediction only 
COG ID[COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTC TCGATAAATT ACAGATACTT TCCGGCGCTG CGCGCTACGA CGCTTCGTGC 
GCTTCAAGCG GCAGCAGGCG TGAGGGTTCA TCGAGCGGTA TCGGCAATAC CTCTCAGGGC
GGCATCTGCC ACTCCTGGGC GGATGACGGC CGCTGCATTT CTTTGCTGAA AATCCTGCTC
TCCAACGACT GTATCTACGA CTGCGCCTAC TGCGTGAACC GCGCCACCAA CCCCGTTCCA
AGAGCCTCTT TCAGTGCCCG GGAAGTGGTG GAGCTGACCA TGGAGTTCTA CCGGCGAAAC
TATATCGAAG GGCTTTTTCT CAGCTCGGCG GTGATGCAGA GTCCCGATCA GACCATGGAG
CGGATGGTCG GCGTGGCTGA ACTGCTTCGA ACCGAAGAGC GGTTCGGAGG GTATATCCAT
CTGAAAATCA TTCCCGGCAG CAGCAGCGCA CTGGTACGCA AAGCCGGACT CTATGCCGAT
CGTATCAGCG TGAACATCGA ACTGCCTTCA TCGGAGTCGC TCAAAAGGCT TGCACCGCAG
AAGCAGAAAC AGGCGATTCT TGAACCGATG TCCCTGATCG GCCGCCAGAT ACAGGAGAGC
CTTGTTGAAC GCAAAGCCAG CCGCCGTGCG CCGAGGTTCG CACCGGCAGG CCAGAGCACC
CAGATGATCA TAGGCGCAAG TCCCGAAAGC GATTTCCAGA TTCTCAAGCT ATCTCAGGGG
CTCTACCGGA AAATGAACCT CAAGCGGGTA TATTATTCGG CTTTCGTTCC GGTCAATGAG
GACAACCGGC TGCCGGTTCT CGCTTCCCCG CCGCTGCTCA GAGAACACCG CCTCTACCAG
GCCGACTGGC TGTTGCGCTT TTACGGCTTC TCTGCAGAAG AGATCCTTTC GGACGATGCT
CCCAACCTCG ACGAAACGTT CGACCCCAAA ACATCATGGG CGCTTCGTCA TCCGGAATTC
TTTCCTGTAG AGATCAATCG AGCCGATTAT GCAGTGCTGC TTCGCGTTCC GGGTATCGGA
GTCACCTCTG CCCGTCGCAT TGTCGCTGCG CGCCGCTTTT CCGTCATCAC GCCCGAGGGG
CTCAAAAAGA TCGGGGTGGT CATGAAACGG GCTAAATATT TTATTACCTG CTCCGGCAGG
CCTTTTGAAA AAATCGACCG TCAGCCGGCC ATGCTTCAAA GCAGTCTTCT GCTTGGCGAC
GGCGGAGATA CAGCCGTTAA AAAACCGCCG AAGCAGCTTG TCCTGCCCGG CATTTTTACC
TGA
 
Protein sequence
MEILDKLQIL SGAARYDASC ASSGSRREGS SSGIGNTSQG GICHSWADDG RCISLLKILL 
SNDCIYDCAY CVNRATNPVP RASFSAREVV ELTMEFYRRN YIEGLFLSSA VMQSPDQTME
RMVGVAELLR TEERFGGYIH LKIIPGSSSA LVRKAGLYAD RISVNIELPS SESLKRLAPQ
KQKQAILEPM SLIGRQIQES LVERKASRRA PRFAPAGQST QMIIGASPES DFQILKLSQG
LYRKMNLKRV YYSAFVPVNE DNRLPVLASP PLLREHRLYQ ADWLLRFYGF SAEEILSDDA
PNLDETFDPK TSWALRHPEF FPVEINRADY AVLLRVPGIG VTSARRIVAA RRFSVITPEG
LKKIGVVMKR AKYFITCSGR PFEKIDRQPA MLQSSLLLGD GGDTAVKKPP KQLVLPGIFT