Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0227 |
Symbol | |
ID | 6354683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 255185 |
End bp | 256552 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642667857 |
Product | transposase IS4 family protein |
Protein accession | YP_001942303 |
Protein GI | 189345774 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCAG ACTTTCTTGT CGCCGATCGA GATTCGCTTT ATCTTTTGCC ACCATCCGTT CAGGAGTGGT TGCCGGCCAA TCATCTTGCA CGCTTTATTG TTGATATTGT TGCGCAGCTT GATCTTACTC CATTGAGAGA CGCCTATGCA GGCAGAGGTT GCAAAGCCTA TGATCCGGCG ATGTTGCTGA CTCTCTTGTT TTACGGTTAT GCCACTGGAA CGTTTTCAAG CAGAAAGCTG GAACTTGCCA CTTATGAATC CATAGCGGTC CGCTATATCA CCGGAAACAG TCATCCAGAT CATGACACCA TAGCAAATTT TCGGAACCGC TTTCTCGGCG AACTGAAACC CTTTTTTATC CAGATTTTGA GTCTTGCTCA CGAAATGAAC ATCCTCAAGA TCGGCAAGAT CAGTATTGAT GGCACCAAAA TCAAAGCCAA TGCTTCCAAA CATCAGGCAC TGAGTTGGGG GCATGCTTGC AAAATCGAAA AGCAGTTGAA AGAGGAAGTT GACTCCCTGC TTCGTCAGGC TGAACTTGCA GACCAGTCAA CAATTCCTGA CGGGATGAGT ATTCCTGCAG AGCTTGAGCG CCGTGAAAAA AGGCTTGAAG CTATTGCCAA GGCAAAGTGT GAGATTGAAC GCCGGGCTGA GGAGCGATAC GAAAAAGAAA AAGCTGAACA TGTGGCAAAA CTGGCAGAGC GTGAACGGAA AGCGCAAGAG AGCGGCAAGA AAAGTAGAGG CAAAATACCG AAAGCACCAG AGCCGGGAGT GAAGGATCGC GACCAGGTTA ATTTGACGGA CGAGGAGTCA AGAATCATGC CGGTATCGGG CGGTGGATTC ATGCAGGCCT ATAACGCTCA GGCGAGTGTT GATCTCGACA CCATGCTGAT GGTCGCAGTT CACGTCACCC AACATACAAA CGATAAACTT GAGCTCCAGC CAGCTTTTGA TGAGCTAAAA AAACTACCTG CAAAGCTGGG AAAAGTAGAG GAGGCAACTG CTGACGCCGG ATATTTCAGC GAAAAGAATG TTGAGCTTTG TGAAACAGAA GAGATAGTCC CCTACATTGC GGCTGGACGA GAATCACATA ATCAGTCACT TGCTGACCGA TTCAGCGAAC CAGAGCCATT AGCAAAAGAT GCTGATGCGG TAACAACAAT GAAACACCGC TTGAAAACAA AGGATGGAAA GGCATTCTAT GCACGCCGCA AATGTACGGT TGAACCGGTG TTTGGTGTCA TAAAATCAGT GCTGGGCTTC CGGCAGTTCT TGCTCAGAGG CATAGAAAAT GTCACAGGGG AATGGAATCT TGTCGGTATT GCGTGGAATC TGAAGCGATT GAATGTGTTA CGCCAGATAA TGGCCTGA
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Protein sequence | MHSDFLVADR DSLYLLPPSV QEWLPANHLA RFIVDIVAQL DLTPLRDAYA GRGCKAYDPA MLLTLLFYGY ATGTFSSRKL ELATYESIAV RYITGNSHPD HDTIANFRNR FLGELKPFFI QILSLAHEMN ILKIGKISID GTKIKANASK HQALSWGHAC KIEKQLKEEV DSLLRQAELA DQSTIPDGMS IPAELERREK RLEAIAKAKC EIERRAEERY EKEKAEHVAK LAERERKAQE SGKKSRGKIP KAPEPGVKDR DQVNLTDEES RIMPVSGGGF MQAYNAQASV DLDTMLMVAV HVTQHTNDKL ELQPAFDELK KLPAKLGKVE EATADAGYFS EKNVELCETE EIVPYIAAGR ESHNQSLADR FSEPEPLAKD ADAVTTMKHR LKTKDGKAFY ARRKCTVEPV FGVIKSVLGF RQFLLRGIEN VTGEWNLVGI AWNLKRLNVL RQIMA
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