Gene Clim_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0220 
Symbol 
ID6354676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp242705 
End bp244129 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content51% 
IMG OID642667851 
Producthypothetical protein 
Protein accessionYP_001942297 
Protein GI189345768 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAT ATTATTTTGC TATACTTTCA GTAAGCTGTT GTTGCGATGA GAGTAAGCAG 
TGGCCGGTCG CAGGATGCCC CATTAACTTA CGTGCCGAAC CTTTTCCCCT CCTGCATCAC
TCTCAGAGTT ACTATCTTTT TTACCGTTTG CACCTGCTTG TTTTTTCGGC TATTTTCATA
CTCAATGATA AAATCAGCCG AATCATGCCC TACAAAACCA GAACACTTGA GATCTTTTTC
CTGCAAGCGA GTCAACAATT CCCCGTCATG CTGCTGACCG GAGCTCGCCA AACCGGAAAA
ACAACGTTTC TGCGACACCT TGCAGGAGAA AATCGCTCGT ATGTCACTCT TGACGACCCG
ATGCTCCGGG CACTCGCAAG GGAAGAGCCC GCACTCTTCC TGCAACGCTT TACGTCACCG
GTTCTCATCG ACGAAATCCA GTATGCTTCC CAGCTTCTGC CCTGCATCAA AATGGCGGTG
GACAACGAAC CGCAAGCCGG AAAATTCTGG ATCACCGGCT CCCAGCAGTT CCATTTGATG
AAGGGGGTCA CTGAATCGCT TGCCGGTCGT GTCGGGGTGG TCAACCTGCT TGGATTCTCG
CAGAGAGAGC TTTTGGACAC TCCCTCTGCA GAGCCGTTTC TGCCGGTTCC GGAAGTCATG
AAACAACGGG CAGAAAGCCG GCAATTGCTT CTGCCCGAAC TCTACCGGAA AATCTGGCTC
GGATCGTTTC CCGCTCTCCA TCAGGAAAAT CCTGCCGATC ATGACCTGTT TTACAGTTCA
TACGTCCAGA CCTATCTGCA ACGTGATGTG CGGGATCTTG CCAATGTCGG CGACGAAAGC
GCATTCATGG GATTTCTCCG CTCCTGTGCA GCACGCACCG GACAGATGCT CAATATCCTG
GACCTTTGCC GCCAGAGCGA CATCAACCAT GCGACCGGAA AACGATGGCT CTCGATTCTT
GAAAATTCAG GCATCGTCTA CCTGCTCGAA CCATGGCACA CCAATATCAA TAAAAGAGTG
GTGAAAACCC CGAAACTGTA CTTTCTCGAT ACGGGACTTG CAGCCTGGCT GACCGAGTGG
ACTTCACCCG AAACGCTGGA AGCGGGAGCG ATGTCAGGAG CCATTCTTGA AAGCTGGGTT
GTATCGGAAA TCATCAAAAG CTGGTGGCAC AATGGCAAGC GTGCCCCCAT TTACTACTAT
CGCGACAAAG ACGCTAAAGA GGTCGATCTG CTCATTCATC AGAACGGCAC ACTCTATCCG
ATAGAGATAA AAAAATCGGC TAATCCGGGA AAAGATGCTA TTCGCCATTT CCAGGTGCTT
CAAACCCTGA AACAACCCAT CGGGCAGGGA TGCATCATCT CGCTTGCCCC CATGTATCTC
CCGATCACAT CAACCATCGA TAACGTACCA GTGGGAATGC TGTAA
 
Protein sequence
MAQYYFAILS VSCCCDESKQ WPVAGCPINL RAEPFPLLHH SQSYYLFYRL HLLVFSAIFI 
LNDKISRIMP YKTRTLEIFF LQASQQFPVM LLTGARQTGK TTFLRHLAGE NRSYVTLDDP
MLRALAREEP ALFLQRFTSP VLIDEIQYAS QLLPCIKMAV DNEPQAGKFW ITGSQQFHLM
KGVTESLAGR VGVVNLLGFS QRELLDTPSA EPFLPVPEVM KQRAESRQLL LPELYRKIWL
GSFPALHQEN PADHDLFYSS YVQTYLQRDV RDLANVGDES AFMGFLRSCA ARTGQMLNIL
DLCRQSDINH ATGKRWLSIL ENSGIVYLLE PWHTNINKRV VKTPKLYFLD TGLAAWLTEW
TSPETLEAGA MSGAILESWV VSEIIKSWWH NGKRAPIYYY RDKDAKEVDL LIHQNGTLYP
IEIKKSANPG KDAIRHFQVL QTLKQPIGQG CIISLAPMYL PITSTIDNVP VGML