| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0206 |
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| Symbol | alaS |
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| ID | 6354662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 230580 |
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| End bp | 233246 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642667838 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001942284 |
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| Protein GI | 189345755 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCA GAGAAATAAG GCAGTCGTTT TTAGATTTTT TTGCCGGCAA AGAACATAAA
ATCGTCCGTT CGGCTCCGGT AATTCCGGCA GACGATCCGA CATTGCTCTT TACCAATGCC
GGAATGAACC AGTTCAAAGA CGTGTTTCTC GGAAAGGGTT CCCGTCCCTA TGTCAGGGCT
GCCGATACCC AGAAATGCAT CAGGGCTTCA GGAAAGCACA ACGACCTTGA AGATGTGGGA
AGGGACACCT ACCATCACAC TTTTTTTGAG ATGCTCGGCA ACTGGTCCTT CGGTGATTAC
TATAAAAAAG AGGCTATTTC CTGGGCCTGG GAGTTGCTTA CCTCTGTCTG GAAACTTCCA
AAAGAACGAC TCTACGCTAC CGTTTTCCGC GATGACGACG AGAGCTTCCA GCTCTGGCAG
ACAGTGACGG ATATTCCGCA CGATCACATT CTCCGGTTCG GCGAAAAAGA TAACTTCTGG
GAAATGGGAG AGTCCGGTCC CTGCGGTCCC TGTTCGGAAA TTCATATTGA CCTGACGGAG
GATGGTTCCG GAAAATCGCT GGTCAATGTC GGCGATTACC GGGTAATCGA ACTCTGGAAC
CTTGTTTTTA TCCAGTACAA CCGCCAGGGC GACGGACGCC TCGAGCCGCT GCCGCAGAGA
CATGTCGATA CCGGTATGGG TTTCGAGCGG GTCTGCGCTG TCATGCAGGG GAAAGGTTCG
AATTACGATA CCGATGTTTT TCGGCCTCTT TTCGACCGGA TTACCGAAAT TACCGGGGTC
GTGTATAAAG CCACCATGGA CGATCCGTGC GATATTGCCA TGCGGGTGAT TGCCGATCAT
GCAAGGACGC TGACCTTTGC GCTCTCTGAC GGCGCCATGC CCTCCAACGA AGGGCGCGGA
TACGTGCTTC GCAGAATTCT GCGCAGGGCA TTGCGCTATT CCAAAACGCT TGGCTGCAGC
GAACCGATTC TCCACCAGCT CGTGGGGACT CTTGCCGTGT CGATGGGCGA AGAGTTTCCC
GAACTGGTGA AGCAGCAGGA GACGGTATCG AGAATCGTCA GGGCTGAAGA GGAGAGTTTT
CTTGCAACGC TCGACCGCGG CATTGAAATT TTCAATGAAG TCATTGCCGG AGCCAGGGCT
GCCGGTGCTG CCGCCATAAC TGGCGATGAT GCGTTCAGGC TGTACGATAC CTTTGGATTT
CCGCTCGATC TTACCAGACT TATGGCTGCT GAAGCAGGAT TCGAGGTCGA TGAACCGGGA
TTCGAACACT GCATGCAGGA GCAGAAAACC CGCGCCCGGC AGGACAGGAA AGACAAACGG
CAGCTTCAGG AAGACGGCGG GGAGTGGATG TGGTTCTCCG AAGAGAGAAC TTCGGTATTC
ACCGGTTATG ACTCGCTTGA AGAGCTCTCC TCCATTGCCG GAGTGAGCAT GCTGCCCGAC
AGGGTTCTTC TCGTGCTTGA TCGCACACCG TTTTATGCGG AAAGCGGCGG GCAGTCGGGC
GATTGCGGAT GGATAGAAAC CGCGGAGTAC CGTCTGAAGG TATCCGATAC CCGAAAGGAT
GGAGACGCAA TCGTTCATGT CGTCACGGAA GCTCACGATA CCGCTCGCGA CAGCGCAATC
GACCCTGCCG ATGTGTCGTT CGACGGCGGA AAACTGGCCT GCCGGGCATC GGTTGACCGG
GCGAACCGTC AGGGAACGGA GCGGAACCAT ACGGCGACGC ACCTCCTGCA TGCCGCATTG
CGAAGGATTC TTGGCCAGCA TGTGCAGCAG AAAGGTTCGT TCGTCAGTGC CGAACGGTTG
CGGTTCGATT TCAGTCACTT TTCAAAACTC ACCTCCGGGG AGCTCGAAAG CGTCGAATCC
GAGGTCAATG AACAGATCAG AAGCGCCGAA ACGGTAATAA AGCATCAGGA TGTGCCTTAC
GACGAGGCGC TCGGAAAAGG TGCTCTTGCC TTTTTCGGCG ATAAATATGC CGACCGTGTA
CGGGTAGTCG AAATTCCCGG TCTGTCGATC GAGCTTTGCG GCGGTACGCA TGTGGACAGT
ATCGGCCAGA TCGGCCTCTT CAAGATCGTC AGCGAATCGT CGGTCGCTTC CGGCGTTCGC
CGTATAGAGG CCTTGACCGG AAAAGCGGCG GAGCAGCTCA TGTGGAAAGA GTACCGCGAA
CTGCAGGAGA TCCGTCACAT GCTGAAGCTC AAGGCCGAAG AACCGGTGAC GGCCAAAATC
GTCGAACTGG CGGAATCGAA GAAGGAACTT GAGAAGCTGC TGCAGGAGTA CCGTTCTTCC
GCTCTTGCCG ACATCCTGCT TCACGCGCTC GATGCTTCCG AAGAGGTCAA CGGTATCCGC
ATCATGGCCC GGATGCTCGA TCATGTGGAC GCCGAAGCGC TTCGCCAGGC AACGCTTGCG
CTGCGCGAAA AGGTTGCCGG TTCGGCCGGG ATCCTCTGTA CCGTGGATGA AGGGAAGGTA
TCGCTTATCG CTTTTGCCGG AGATCGCGCG GTCAGGGATT TCGGCATCGA TGCCGGAAAG
CTCGTCCGCG AAGCTGCCAA AAATGTTCAG GGTGGCGGTG GCGGCAAGCC CGAGTTTGCC
ACTGCCGGCG GAAAAAATCC GGAAGGAATA GAGAAAGCTT TTGAAGTATT TGTTGCCGCA
GTCAGAGAAA AGGTCTCGGC TGTATAA
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| Protein sequence | MKSREIRQSF LDFFAGKEHK IVRSAPVIPA DDPTLLFTNA GMNQFKDVFL GKGSRPYVRA
ADTQKCIRAS GKHNDLEDVG RDTYHHTFFE MLGNWSFGDY YKKEAISWAW ELLTSVWKLP
KERLYATVFR DDDESFQLWQ TVTDIPHDHI LRFGEKDNFW EMGESGPCGP CSEIHIDLTE
DGSGKSLVNV GDYRVIELWN LVFIQYNRQG DGRLEPLPQR HVDTGMGFER VCAVMQGKGS
NYDTDVFRPL FDRITEITGV VYKATMDDPC DIAMRVIADH ARTLTFALSD GAMPSNEGRG
YVLRRILRRA LRYSKTLGCS EPILHQLVGT LAVSMGEEFP ELVKQQETVS RIVRAEEESF
LATLDRGIEI FNEVIAGARA AGAAAITGDD AFRLYDTFGF PLDLTRLMAA EAGFEVDEPG
FEHCMQEQKT RARQDRKDKR QLQEDGGEWM WFSEERTSVF TGYDSLEELS SIAGVSMLPD
RVLLVLDRTP FYAESGGQSG DCGWIETAEY RLKVSDTRKD GDAIVHVVTE AHDTARDSAI
DPADVSFDGG KLACRASVDR ANRQGTERNH TATHLLHAAL RRILGQHVQQ KGSFVSAERL
RFDFSHFSKL TSGELESVES EVNEQIRSAE TVIKHQDVPY DEALGKGALA FFGDKYADRV
RVVEIPGLSI ELCGGTHVDS IGQIGLFKIV SESSVASGVR RIEALTGKAA EQLMWKEYRE
LQEIRHMLKL KAEEPVTAKI VELAESKKEL EKLLQEYRSS ALADILLHAL DASEEVNGIR
IMARMLDHVD AEALRQATLA LREKVAGSAG ILCTVDEGKV SLIAFAGDRA VRDFGIDAGK
LVREAAKNVQ GGGGGKPEFA TAGGKNPEGI EKAFEVFVAA VREKVSAV
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