| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0197 |
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| Symbol | |
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| ID | 6354653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 218126 |
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| End bp | 222616 |
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| Gene Length | 4491 bp |
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| Protein Length | 1496 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642667829 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001942275 |
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| Protein GI | 189345746 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.55668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTT CACAGGGAGC ATCACCGTTA AAAGGTGATT TTTCAAGGAT AAAATTCAGT
ATAGCATCTC CCGAAAGCAT TCTCGCCCAT TCAAGGGGCG AGGTGCTCAA GCCGGAGACA
ATCAATTATC GTACCTTCAA GCCTGAACGC GACGGTTTGA TGTGCGAAAA AATATTCGGT
CCGACCAAGG ACTGGGAATG TTACTGCGGG AAATACAAAA GGGTTCGCTA CAAAGGCATC
ATCTGTGATC GCTGCGGTGT GGAAGTTACC ACAAAAAGCG TCCGCCGGGA GCGCATGGGC
CATATCTCCC TTGCGGTTCC TGTTGTGCAT ACCTGGTTTT TCCGTTCGGT TCCCAGTAAA
ATAGGGGCGT TGCTCGATCT TTCGACAAAA GAGCTCGAAC GCATCATCTA TTATGAAGTC
TATGTGGTCA TCAATCCTGG TGAACCCGGA GAAAAGCAGG GGATCAAGAA GCTCGACCGG
TTGACCGAGG AGCAGTATTT CCAGATCATT ACCGAATATG AGGACAATCA GGATCTCGAC
GATACCGACT CTGCAAAGTT TGTGGCAAAG ATGGGCGGAG AAGCCATTCA TATGCTACTC
AAAAGCATCG ATCTGAACGA GACCGCCGTA ACCCTTCGGA AAGTGCTCAG GGAGAGCAGT
TCCGAGCAGA AGCGCGCTGA CGCGCTGAAA CGGCTTAAAG TTGTCGAATC GTTCAGAAAA
AGCTATGAAC CGCAGAAAAA GACACGCAAG AAACCAGGCG GACTTTTTCC CGAAGACGAA
ATTCCCGAGC CCTATGTTTA TGAAGGTAAC AAGCCAGAAT ATATGGTTAT GGAAGTTGTG
CCGGTTATTC CTCCCGAGCT CAGGCCGCTT GTGCCTCTCG AGGGCGGGCG GTTTGCGACT
TCCGATCTCA ACGATCTTTA CCGCAGGGTG ATTATCCGCA ACAATCGCCT GAAAAAGCTC
ATCGACATTC GCGCTCCGGA GGTCATTCTG CGTAACGAAA AGCGCATGCT GCAGGAGGCT
GTGGATGCCC TGTTCGATAA CTCGCGCAAG GCAAATGCGG TCAAGACCGG CGAATCGAAC
AGACCGTTGA AGTCTCTTTC CGATGCTCTC AAGGGAAAGC AGGGCCGCTT CCGTCAGAAT
CTGCTCGGTA AAAGGGTTGA CTACTCCGGC CGTTCGGTGA TCGTTGTCGG TCCGGAACTG
AAGCTGCATG AGTGCGGTCT TCCGAAAAGC ATGGCAATCG AGCTGTTTCA GCCGTTTGTG
ATCCGTCGTC TTGTCGAACG CGGCATAGCC AAATCCGTAA AATCCGCCAA AAAGCTCATA
GACAAGAAGG ATCCCATTGT ATGGGACGTG CTTGAGAAGG TTATTGACGG TCGTCCTGTA
CTTCTGAACC GTGCGCCTAC CCTGCATCGT CTCGGTATCC AGGCTTTTCA GCCGGTACTG
ATCGAAGGGA AGGCCATCCA GATTCATCCC CTGGTCTGTA CGGCGTTCAA CGCTGACTTT
GACGGCGATC AGATGGCTGT ACACGTTCCG CTTTCACAGG AAGCCCAGCT TGAGGCATCG
CTTCTGATGC TTTCGTCACA TAACCTCATT CTTCCGCAGT CCGGTAAACC GGTGACCGTT
CCTTCCCAGG ACATGGTTCT CGGCATGTAC TATCTGACGA AATCGCGTTC GGGCGAAGAG
GGCGAAGGCA GGATATTCTA TGATTCCGAA GATGTTCTCA TCGCCTACAA CGAGCAGAGA
GTCGGACTTC ATGCGCAGAT TTTCGTCTGT TTCAACGGTC TTGTCGATCA GAAATTCGAT
CCGCTTCGCG TGCTCGAAAC GGTCATTGAT GAAAAATCCG AAAAATACGG ATGGCTCCGT
TCACAGCTCG AGCAGAAGAA AATGCTGCTG ACCACGGTCG GCAGGGTTAT TTTCAATCAG
CATGTTCCCG AGTCCATTGG TTTCATCAAC AGGGTTATCG ACAAGAAGGT CGCCAAAGAG
CTTATCGGCC GTCTCAGCAG CGAAGTCGGT AATGTCGAAA CGGCAAAATT CCTTGACAAC
ATCAAGGAGG TCGGATTCCA TTACGCCATG AAAGGCGGTC TTTCCGTCGG TCTTTCGGAT
GCCATTGTTC CCGAAACGAA GGTCAGGCAC ATAAAGAGCG CACAGAAAGA CAGCACCAAG
GTTGTCAAGG AGTACAATCG CGGAACGCTT ACCGATAACG AGCGCTACAA CCAGATTGTC
GATGTCTGGC AGAAAACGTC GAACATTGTA GCAGAGGAGT CCTATCAGAA GCTGAAAAAA
GACAGAGATG GTTTCAACCC GCTCTATATG ATGCTTGATT CCGGCGCCCG AGGCTCGAGA
GAGCAGGTGC GCCAGCTGAC CGGTATGAGA GGTCTTATTG CCCGACCCCA GAAGTCGATG
TCGGGTCAGC CGGGTGAAAT TATCGAAAAC CCGATTATTT CGAACCTGAA GGAAGGGTTG
ACGGTGCTCG AGTATTTTAT TTCCACGCAC GGTGCCCGTA AAGGTCTTTC TGACACCTCG
CTGAAAACGG CGGATGCAGG TTACCTGACC AGAAGGCTGC ACGATGTAGC CCAGGATGTG
ATTGTCACCA TCGATGACTG CGGTACCACC CGAGGTCTGC ATGTGTATCG TAATATCGAA
GAGGAGACCA GCGGTCAGAT CAAGTTCCGT GAAAAGATCA GAGGGCGCGT AGCTGCCAGG
GATATTTATG ATACCCTCAA CAACAACGTC GTCGTAAAGG CCGGAGAGAT CATTACCGAT
GAACTTGCAG ATCTTGTTCA GGATACAGCA GGTGTTGAAG AGGCAGAAAT CCGTTCGGTG
CTCACCTGCG AGTCAAAAGT CGGTATCTGT TCGAAATGCT ACGGCACCAA CCTCTCTGTC
CACAAGCTTG TTGAAATCGG TGAAGCTGTA GGTGTTATTG CAGCGCAGTC GATCGGCGAA
CCTGGTACGC AGCTGACGCT TCGTACCTTC CACCAGGGCG GTACGGCACA GGGTGGTATT
TCCGAAACCG AGACCAAGGC CTTCAATGAA GGTGTTCTTG AGTTCGAAGA TGTCAAAACC
GTAGAGCACA GCAGCATCAA TGAGGACGGA GTCGAAGATC TTCGTACGAT CGTTATCCAG
AAGAATGGTA AAATCAATAT TGTCGATCCT GAATCGGGCA AGGTTCTCAA ACGGTATGTG
ATACCGCATG GCGCCCATCT CCATTGCCGT CCAGGAAATG CGGTAAAAAA AGACCAGGTG
CTTTTCAGCA GCGAGCCCAA CAGCACCCAG ATTATTGCCG AAACACCGGG TTCGGTGAGA
TTTGCCGATA TCGAAAAAGG TGTCACCTAC AAGGAAGAGG TTGATCCGCA GACAGGGTTT
GCCCAGCATA CCATCATCAA CTGGCGTTCG AAGCTCCGTG CCAACGAGAC AAGGGAGCCG
AGGATTATGA TTATCGACGC CAGCGGCGAG ATCAGGAAAA CCTATCCGGT GCCGATCAAA
TCAAACCTCT ATGTAGAGGA CGGCCAGAAG GTGCTTCCGG GCGATATCAT CGCCAAGGTT
CCAAGAAACC TCGATCGAGT CGGTGGTGAT ATTACGGCAG GTCTTCCGAA GGTAACCGAG
CTGTTTGAAG CCCGCATTCC TTCCGATCCG GCTATCGTTT CCGAGATTGA CGGTTATGTG
AGTTTTGGTT CACAGCGCAG GAGCAGCAAG GAGATCAAGG TCAAGAACGA TTTCGGGGAA
GAAAAAATCT ATTATGTCCA GGTCGGTAAA CATGTGCTGG CCAACGAAGG CGATGAGGTG
AAGGCCGGCG ATCCGATGAC GGACGGTGCC GTTTCTCCGC AGGATATTCT TCGTATTCAG
GGACCTAACG CAGTGCAGCA GTATCTGGTT AACGAGATAC AGAAAGTATA CCAGATCAAT
GCCGGCGTTG AAATCAACGA CAAGCACCTT GAGGTTATTG TCCGTCAGAT GCTGCAGAAA
GTCCGTGTGG AAGAACCTGG CGATACCGAG CTGCTTCCGG GTGACCTGAT TGACCGAAGT
GCCTTTATCG AAGCGAACGA AAATATCGCT GAAAAGGTCA GGGTTACCGA CAAGGGTGAT
GCTCCGGCAA GAATACAGGA TGGCCAGCTC TGCAAGATGC GTGATATCGC CAAACTGAAT
CGTGAATTGC GCAAAAACAG CAAGAAGCTC GTCGTTATCG AGCCTACGCT TCAGGCGACT
TCGCATCCGG TGCTGCTTGG TATTACCAGT GCGGCTCTGC AGACGGAGAG CGTTATATCC
GCCGCATCGT TCCAGGAAAC GACAAAAGTG CTGACTGATG CCGCTGTTGC CGGAAAGATC
GACAACCTTC TCGGTCTCAA GGAAAATGTC ATTGTCGGCA AGCTTATTCC CGCAGGCACA
GGCCTGAAGC GTTATCGCAC CATCAGGCTG ACCGGCGATA CGCAGAAGCA GGCTGCTGTT
GCAGAGGCGG TTGCTGCGCC GGATAAAGAG ATCGAGGGAC ACGGCATCTG A
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| Protein sequence | MIFSQGASPL KGDFSRIKFS IASPESILAH SRGEVLKPET INYRTFKPER DGLMCEKIFG
PTKDWECYCG KYKRVRYKGI ICDRCGVEVT TKSVRRERMG HISLAVPVVH TWFFRSVPSK
IGALLDLSTK ELERIIYYEV YVVINPGEPG EKQGIKKLDR LTEEQYFQII TEYEDNQDLD
DTDSAKFVAK MGGEAIHMLL KSIDLNETAV TLRKVLRESS SEQKRADALK RLKVVESFRK
SYEPQKKTRK KPGGLFPEDE IPEPYVYEGN KPEYMVMEVV PVIPPELRPL VPLEGGRFAT
SDLNDLYRRV IIRNNRLKKL IDIRAPEVIL RNEKRMLQEA VDALFDNSRK ANAVKTGESN
RPLKSLSDAL KGKQGRFRQN LLGKRVDYSG RSVIVVGPEL KLHECGLPKS MAIELFQPFV
IRRLVERGIA KSVKSAKKLI DKKDPIVWDV LEKVIDGRPV LLNRAPTLHR LGIQAFQPVL
IEGKAIQIHP LVCTAFNADF DGDQMAVHVP LSQEAQLEAS LLMLSSHNLI LPQSGKPVTV
PSQDMVLGMY YLTKSRSGEE GEGRIFYDSE DVLIAYNEQR VGLHAQIFVC FNGLVDQKFD
PLRVLETVID EKSEKYGWLR SQLEQKKMLL TTVGRVIFNQ HVPESIGFIN RVIDKKVAKE
LIGRLSSEVG NVETAKFLDN IKEVGFHYAM KGGLSVGLSD AIVPETKVRH IKSAQKDSTK
VVKEYNRGTL TDNERYNQIV DVWQKTSNIV AEESYQKLKK DRDGFNPLYM MLDSGARGSR
EQVRQLTGMR GLIARPQKSM SGQPGEIIEN PIISNLKEGL TVLEYFISTH GARKGLSDTS
LKTADAGYLT RRLHDVAQDV IVTIDDCGTT RGLHVYRNIE EETSGQIKFR EKIRGRVAAR
DIYDTLNNNV VVKAGEIITD ELADLVQDTA GVEEAEIRSV LTCESKVGIC SKCYGTNLSV
HKLVEIGEAV GVIAAQSIGE PGTQLTLRTF HQGGTAQGGI SETETKAFNE GVLEFEDVKT
VEHSSINEDG VEDLRTIVIQ KNGKINIVDP ESGKVLKRYV IPHGAHLHCR PGNAVKKDQV
LFSSEPNSTQ IIAETPGSVR FADIEKGVTY KEEVDPQTGF AQHTIINWRS KLRANETREP
RIMIIDASGE IRKTYPVPIK SNLYVEDGQK VLPGDIIAKV PRNLDRVGGD ITAGLPKVTE
LFEARIPSDP AIVSEIDGYV SFGSQRRSSK EIKVKNDFGE EKIYYVQVGK HVLANEGDEV
KAGDPMTDGA VSPQDILRIQ GPNAVQQYLV NEIQKVYQIN AGVEINDKHL EVIVRQMLQK
VRVEEPGDTE LLPGDLIDRS AFIEANENIA EKVRVTDKGD APARIQDGQL CKMRDIAKLN
RELRKNSKKL VVIEPTLQAT SHPVLLGITS AALQTESVIS AASFQETTKV LTDAAVAGKI
DNLLGLKENV IVGKLIPAGT GLKRYRTIRL TGDTQKQAAV AEAVAAPDKE IEGHGI
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