| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0193 |
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| Symbol | rplA |
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| ID | 6354649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 212263 |
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| End bp | 212952 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642667825 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001942271 |
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| Protein GI | 189345742 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000225522 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGGAA AAAAATACAG GGAGGCCCTG GCAAAAATAG ATCGCTTTCA GGAGTATGAT
CTTGCTGAGG CTGTCGGGAA AATCAGGGAA ATTACTGAAG CTAAATTCGA TGCGACCATC
GATGTCGCTT TGCGTCTGGG AGTTGATCCG CGTCACGCCG ATCAGGTTGT CCGCGGCACG
GTGATGCTGC CTCACGGTAC AGGTAAAACT GTTTCCGTGC TTGTTGTCTG CAAGGAAGCC
AAGGCAGAAG AGGCAAAAGA GGCCGGAGCC GATCTGGTCG GATTCGAAGA GTACATTGAA
AAAATCCAGT CCGGCTGGAC CGACGTTGAC GTTATCATAG CCACTCCGGA CGTCATGGGT
CAGCTTGGCA AGGTTGCAAA AATTCTGGGC CCTCGCGGTC TCATGCCCAA TCCGAAATCC
GGAACGGTTA CCATGGATGT CGCTAAAGCC GTTAAAGAGG TCAAGGCCGG CAAGATCGAG
TTCAGGGTTG ATAAAGCCGG AAATGTTCAT GCTCCGGTAG GAAAGGTTTC TTTTCAGCCT
GAGCATCTGG TTGAAAATAT CACCAGTTTT GTCAGGGAGG TTGTCCGTTT GAAACCGTCT
GCTGCGAAGG GGCAATATCT CCAGAGTATT GCGGTTTCGA GCACGATGTC GCCAAGCGTG
AAGGTCAGAA AAGAAAAATT TGTTGCCTAA
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| Protein sequence | MAGKKYREAL AKIDRFQEYD LAEAVGKIRE ITEAKFDATI DVALRLGVDP RHADQVVRGT
VMLPHGTGKT VSVLVVCKEA KAEEAKEAGA DLVGFEEYIE KIQSGWTDVD VIIATPDVMG
QLGKVAKILG PRGLMPNPKS GTVTMDVAKA VKEVKAGKIE FRVDKAGNVH APVGKVSFQP
EHLVENITSF VREVVRLKPS AAKGQYLQSI AVSSTMSPSV KVRKEKFVA
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