Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0182 |
Symbol | |
ID | 6355837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 199470 |
End bp | 201665 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642667810 |
Product | photosystem P840 reaction center, large subunit |
Protein accession | YP_001942260 |
Protein GI | 189345731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000010763 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAC AAGTGAATCC TGCAGGAGTC AAGCCAAAGG GATCTGTCCC ACCTCCCAAG GGGAATGCTC CTTCTCCAAA GGGAAACGGC GCACCAGGCG GACCGTCTGT CATCAAGGAA CAGGACGCTG CCAAAATGAG GAGATTTCTG TTTCAGAGAA CAGAAACGAG AACGACGAAG TGGTATCAGG TATTTGATAC CGACAAGCTT GACGACGAAC AGGTAGTCGG CGGTCATCTC GCCCTTCTCG GGGTTATGGG TTTTCTCATG GCCATCTACT ACATCTCCGG AATCCAGGTA TTTCCGGGGG GTTATGCCGG TTTTCACGAT AACTGGTTCT ATCTTACTAT CAAGCCGAGG ATGGTATCTC TCGGTATCGA TACGTACAGC ACGAAAACTG CCGATCTTGA GCAGGCTGCC ATTAACCTTC TCGGCTGGGC TCTTCTTCAC GTCATTTCCG GTTCGATTCT GCTTTTCGGA GGCTGGAGGC ACTGGACTCA CAACCTGACC AATCCGTTTA CCGGCAGGGC TGGCAACTTC CGCGACTTCC GTTTTCTCGG AAAGTTCGGT GACATGGCGT TCAACGGTAC AAGCGCAAAG ACCTACAAGG ATGCGCTCGG ACCTCACACC GTTTACATGT CTCTGCTCTT TCTCGGCTGG GGTCTTGTGA TGTGGTTTGC TCTCGGCATT CCTCCCGTTC CCGATTTCCA GACAATCAAC TCAGAGCCTT TCATGTCGTT CGTGTTCGCG GTGCTCTTTT TCGCGCTCGG CATCTACTGG TGGAACAATC CTCCAAATGC AGCCATTCAC CTCAATGATG ATATGAAGGC CGCGTTTTCC GTTCACCTGA CAGCTATCGG ATACATCAAC ATTGCTCTCG GCGTCATTGC TTTCGTCGCT TTCCAGCAGC CCTCTTTCCA TGCGTATTAC AAGGAGCTCG ACAATCTCGT CTTCTACCTG TACGGTGAAC CGTTCAACCG TGTCAGCTAC GACTTCGTAC AGGAAGGCGG CAGAATCATC TCCGGAAAGA AAGAGTTCGT TGAATTTGCC CCTTATGCTA TTCTTCCGAA GAACGGCCAG GCATTCGGTA TGTCGAGAGT GGTCATCAAC CTGATCACCT TCAACCATAT CATCTGCGGC GTACTCTATG TTTTTGCCGG TGTCTATCAT GGCGGTCAGT ATCTCCTCAA GATTCAGCTG AACGGTCTGT ACAATCAGAT CAAATCGATC TGGATCACCA AAGGACGCGA TCAGGAAGTT CAGGTCAAGA TTCTCGGCAC CGTCATGGCG CTCTGTTTTG CAACCATGCT TTCCGTTTAT GCCGTAATCG TCTGGAACAC CATCTGTGAG CTGAATATTT TCGGCACAAA CATCATGATG TCGTTCTACT GGCTGAAACC GCTTCCGATT TTCCAGTGGA TGTTCACCGA TCCGAGCATC AATGACTGGG TTATGGCACA TGTTATCACA GCCGGCTCAC TATTCTCGCT TATCGCACTT GTGCGTATCG CATTCTTCTC TCATACCTCT CCATTGTGGG ATGATCTCGG ACTGAAGAAG AACTCGTATT CATTCCCTTG CCTCGGCCCT GTTTACGGTG GTACCTGCGG CGTTTCCATT CAGGATCAGC TCTGGTTTGC CATGCTTTGG GGAGTAAAGG GTCTTTCTGC AGTCTGCTGG TACATTGACG GTGCATGGAT CGCTTCGATG ATGTACGGTG TGCCTGTTGC CGATGCGAAG GCCTGGGATT CGGTTGCCGG TCTTGCTCAT CACTATACTT CGGGCATCTT CTATTATTTC TGGACAGAGA CCGTAACGAT CTTCTCGAGT TCTCACCTTT CGGTGATTCT CATGATCGGT CACCTGATCT GGTTCATCAG CTTCGCCGTG TGGTTTGAAG ATCGCGGATC GCGTCTTGAA GGTGCAGATA TTCAGACCCG TACCATCCGC TGGTTCGGCA AGAAGTTCCT GAACAGAGAC GTTACGTTCC GTTTCCCTGT GCTGACGATT TCCGATTCAA AGCTGGCCGG TACCTTCCTC TATTTCGGCG GTACCTTTAT GCTGGTCTTC CTGTTCATCG GTAACGGATT CTATCAGACT GATTCGCCAC TGCCGCCACC GGTAGCAGAG GCTGCTGTTT CCGGACAGCA GATGCTGACT CAGGTTGTGG ATTTCCTGAT CAAGCTGGTA GCCTGA
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Protein sequence | MAEQVNPAGV KPKGSVPPPK GNAPSPKGNG APGGPSVIKE QDAAKMRRFL FQRTETRTTK WYQVFDTDKL DDEQVVGGHL ALLGVMGFLM AIYYISGIQV FPGGYAGFHD NWFYLTIKPR MVSLGIDTYS TKTADLEQAA INLLGWALLH VISGSILLFG GWRHWTHNLT NPFTGRAGNF RDFRFLGKFG DMAFNGTSAK TYKDALGPHT VYMSLLFLGW GLVMWFALGI PPVPDFQTIN SEPFMSFVFA VLFFALGIYW WNNPPNAAIH LNDDMKAAFS VHLTAIGYIN IALGVIAFVA FQQPSFHAYY KELDNLVFYL YGEPFNRVSY DFVQEGGRII SGKKEFVEFA PYAILPKNGQ AFGMSRVVIN LITFNHIICG VLYVFAGVYH GGQYLLKIQL NGLYNQIKSI WITKGRDQEV QVKILGTVMA LCFATMLSVY AVIVWNTICE LNIFGTNIMM SFYWLKPLPI FQWMFTDPSI NDWVMAHVIT AGSLFSLIAL VRIAFFSHTS PLWDDLGLKK NSYSFPCLGP VYGGTCGVSI QDQLWFAMLW GVKGLSAVCW YIDGAWIASM MYGVPVADAK AWDSVAGLAH HYTSGIFYYF WTETVTIFSS SHLSVILMIG HLIWFISFAV WFEDRGSRLE GADIQTRTIR WFGKKFLNRD VTFRFPVLTI SDSKLAGTFL YFGGTFMLVF LFIGNGFYQT DSPLPPPVAE AAVSGQQMLT QVVDFLIKLV A
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