Gene Clim_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0175 
Symbol 
ID6355829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp193271 
End bp193966 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content50% 
IMG OID642667803 
Producthistidine kinase 
Protein accessionYP_001942253 
Protein GI189345724 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACG ATTTTATTTC CACGGTATCG CATGAACTGC GCACGCCGCT TTTTTCGATT 
CTCGGATTTA CCGGCACACT TCTTCGGGAA CAGGATGAAC TCGAGCGTGA GACACGAATG
GAGTTTATTT CGATCATCCA CGATGAGAGC AAAAGGCTTT CCGCCCTGAT CGAGGATGTG
CTGATGATAT CGAAAATCGA TTCAGGCAGG GTCTCCTACA AAAAAAGCGA ACTCGATCCG
TCAATTACTG TTTCGGAGGT ATGCCGGAGC CTGAAAATCA GGGCCGATGA AAAAAACATA
GATCTGCGAC TGAGGGTATG TGCGCCGATG GAGCATATTT TTGCCGATCA GGATTCCCTG
AAACAGGTCG CCATCAACAT TATCGGCAAT GCGCTGAAAT TCACCCCGCC GGGAGGTGTC
GTTCAGGTAA GCCTTTTCTG CGAGGCGCAG ACGATGTGCT TCAGTGTGGA GGATAATGGC
CCGGGCATTC CCGCAGAGGA GGCTGAAAAA ATATTCGAAA AATTCTTCAG GGTTGAACGT
CCCGGAGAGG CTGTCGATGG AACGGGACTG GGGCTTTCCA TCGTCAAGGA GATCGTTGCT
GCTCATGATG GAACGGTCGA GGTAAAAAGT GTCCCGAACC AGAGTACGGT ATTTATGGTT
CGACTGCCGA TATCAATGCA ACCGTGCCGA AAGTAA
 
Protein sequence
MKNDFISTVS HELRTPLFSI LGFTGTLLRE QDELERETRM EFISIIHDES KRLSALIEDV 
LMISKIDSGR VSYKKSELDP SITVSEVCRS LKIRADEKNI DLRLRVCAPM EHIFADQDSL
KQVAINIIGN ALKFTPPGGV VQVSLFCEAQ TMCFSVEDNG PGIPAEEAEK IFEKFFRVER
PGEAVDGTGL GLSIVKEIVA AHDGTVEVKS VPNQSTVFMV RLPISMQPCR K