| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0174 |
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| Symbol | |
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| ID | 6355828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 191750 |
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| End bp | 193246 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642667802 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001942252 |
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| Protein GI | 189345723 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCTC GAGACGATCA TACAACGGTT TTGATTGCTG ACGAGAGCGA GCTTGTCCGA
AAGACGGTTT CCCGTATTGT AGGCCGGCTC GGTTATCATC CGGTTACGGC ATCAGGCGGG
AACGAAGCCG TTTCACTGCT GCAGTCCTCC TCGTTCGACG CGCTTCTTCT CGATATCGCG
TTGTCGGGAA AAGACGGTAT CGATGTGCTG CGTTTCGTGA TTGAGAACAG CTATGCGTTT
CCGGTGATCA TGATATCGGG ATCCGGCGAT ATCGATCAGG TGGTGCAGTG TCTGAAAATG
GGCGCATATG ATTATCTTAC CAAACCTGTC GATGCACATC GGGTGCAGAC CGTTCTGAAA
AATGCCTTTT CTGAATCCGC TCTTCGCCGG AAGGTGCGGT TGCTGACGGC AGCAGTGGAT
CAGAGCCCCG TGGCGGTTGT CATTGCCGAT AACAGGGGGC ATATCGAGTA TGCAAATCCT
TCGTTTATGA CTTTCCGGAA TGCTCTGACA GAGTGTCGGA TGCAGGAAAA TATTTTCGAT
GACGACGCAC AGCCGGAAAA TCTGTCGGTA AAATTCAGGA ATGCCATCGT CTCGGGCAAG
GTCTGGCAGG GAGATTACTG CAACCATAAG CGGAACGGAG AGTTTTCGTG GGAGCGTGCC
ATTATCAGTC CTGTCGCCAG TCAGGGAGAG TCCGGATCCC ATATTCTTGC CTTCATGCAG
GATATAACGG AATCGAGAAA AAATCAGGAA GCCCTTCTGA AAAGTAATCG GCGATTCAGG
GAACTGGCCG ACCTTCTGCC TCAGCCGGTT TTTGAAACCG ACAGCAAAGG CTTCATCACC
TATTCGAACC GTGCGGGGTT CAGTACTTTC GGCTACAGCA GGAAAGCGCT GAAGCAGGGT
CTTCATGCCC TGCAGTTTTT TGCTCCCGAA GATAAAAACC GCCTGATGCA CGCAATTCGG
ATGAAAAAAA ACTCCGGCCC TTCCGGGACT CATGAATTTA CGTTATTCCG GCGTGACGGA
GCCGGATTTC CAGCTCTTGT GTACACTGCG CCCATAACCG AAAGGAAGGG CTCCGGAGGC
TTCAGGGGAA TAGTGATCGA TATTACCGAA CTGAAGGAGA GCGAACGGAT GCTTCGTGAA
AACCGGAAAA AATATCTTGA TCTTTTTCAG GCTATTCCTG ACGCCATTAT TGCAGCCGAT
GCCGAAAGCG GCTTTCTCGT CGAGTGGAAC CGTCAGGGGC AGCTCTTTTT CGGCTATACG
CCCGAGGAGT TTTCCCGGTT GCACATCGGA GATCTTTATC CTGAACCGCT TCGGGAGGAA
GGTTTGGCCT ACTTCAGGAA TGCCTGCACC GGGCAGGCGG TAACGCTGGA AACCCAGATC
GTGACCCGGC AGGGGATACG CATCGATGTG CACATCAGTT CAGCGACCTT CACGACGGAG
CACTTTCGAT GTTTTGTCGG GATTTTCCGA GATATCACCC AGCAGAAGCG TTCTTAG
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| Protein sequence | MPSRDDHTTV LIADESELVR KTVSRIVGRL GYHPVTASGG NEAVSLLQSS SFDALLLDIA
LSGKDGIDVL RFVIENSYAF PVIMISGSGD IDQVVQCLKM GAYDYLTKPV DAHRVQTVLK
NAFSESALRR KVRLLTAAVD QSPVAVVIAD NRGHIEYANP SFMTFRNALT ECRMQENIFD
DDAQPENLSV KFRNAIVSGK VWQGDYCNHK RNGEFSWERA IISPVASQGE SGSHILAFMQ
DITESRKNQE ALLKSNRRFR ELADLLPQPV FETDSKGFIT YSNRAGFSTF GYSRKALKQG
LHALQFFAPE DKNRLMHAIR MKKNSGPSGT HEFTLFRRDG AGFPALVYTA PITERKGSGG
FRGIVIDITE LKESERMLRE NRKKYLDLFQ AIPDAIIAAD AESGFLVEWN RQGQLFFGYT
PEEFSRLHIG DLYPEPLREE GLAYFRNACT GQAVTLETQI VTRQGIRIDV HISSATFTTE
HFRCFVGIFR DITQQKRS
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