Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0174 |
Symbol | |
ID | 6355828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 191750 |
End bp | 193246 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642667802 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001942252 |
Protein GI | 189345723 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCTC GAGACGATCA TACAACGGTT TTGATTGCTG ACGAGAGCGA GCTTGTCCGA AAGACGGTTT CCCGTATTGT AGGCCGGCTC GGTTATCATC CGGTTACGGC ATCAGGCGGG AACGAAGCCG TTTCACTGCT GCAGTCCTCC TCGTTCGACG CGCTTCTTCT CGATATCGCG TTGTCGGGAA AAGACGGTAT CGATGTGCTG CGTTTCGTGA TTGAGAACAG CTATGCGTTT CCGGTGATCA TGATATCGGG ATCCGGCGAT ATCGATCAGG TGGTGCAGTG TCTGAAAATG GGCGCATATG ATTATCTTAC CAAACCTGTC GATGCACATC GGGTGCAGAC CGTTCTGAAA AATGCCTTTT CTGAATCCGC TCTTCGCCGG AAGGTGCGGT TGCTGACGGC AGCAGTGGAT CAGAGCCCCG TGGCGGTTGT CATTGCCGAT AACAGGGGGC ATATCGAGTA TGCAAATCCT TCGTTTATGA CTTTCCGGAA TGCTCTGACA GAGTGTCGGA TGCAGGAAAA TATTTTCGAT GACGACGCAC AGCCGGAAAA TCTGTCGGTA AAATTCAGGA ATGCCATCGT CTCGGGCAAG GTCTGGCAGG GAGATTACTG CAACCATAAG CGGAACGGAG AGTTTTCGTG GGAGCGTGCC ATTATCAGTC CTGTCGCCAG TCAGGGAGAG TCCGGATCCC ATATTCTTGC CTTCATGCAG GATATAACGG AATCGAGAAA AAATCAGGAA GCCCTTCTGA AAAGTAATCG GCGATTCAGG GAACTGGCCG ACCTTCTGCC TCAGCCGGTT TTTGAAACCG ACAGCAAAGG CTTCATCACC TATTCGAACC GTGCGGGGTT CAGTACTTTC GGCTACAGCA GGAAAGCGCT GAAGCAGGGT CTTCATGCCC TGCAGTTTTT TGCTCCCGAA GATAAAAACC GCCTGATGCA CGCAATTCGG ATGAAAAAAA ACTCCGGCCC TTCCGGGACT CATGAATTTA CGTTATTCCG GCGTGACGGA GCCGGATTTC CAGCTCTTGT GTACACTGCG CCCATAACCG AAAGGAAGGG CTCCGGAGGC TTCAGGGGAA TAGTGATCGA TATTACCGAA CTGAAGGAGA GCGAACGGAT GCTTCGTGAA AACCGGAAAA AATATCTTGA TCTTTTTCAG GCTATTCCTG ACGCCATTAT TGCAGCCGAT GCCGAAAGCG GCTTTCTCGT CGAGTGGAAC CGTCAGGGGC AGCTCTTTTT CGGCTATACG CCCGAGGAGT TTTCCCGGTT GCACATCGGA GATCTTTATC CTGAACCGCT TCGGGAGGAA GGTTTGGCCT ACTTCAGGAA TGCCTGCACC GGGCAGGCGG TAACGCTGGA AACCCAGATC GTGACCCGGC AGGGGATACG CATCGATGTG CACATCAGTT CAGCGACCTT CACGACGGAG CACTTTCGAT GTTTTGTCGG GATTTTCCGA GATATCACCC AGCAGAAGCG TTCTTAG
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Protein sequence | MPSRDDHTTV LIADESELVR KTVSRIVGRL GYHPVTASGG NEAVSLLQSS SFDALLLDIA LSGKDGIDVL RFVIENSYAF PVIMISGSGD IDQVVQCLKM GAYDYLTKPV DAHRVQTVLK NAFSESALRR KVRLLTAAVD QSPVAVVIAD NRGHIEYANP SFMTFRNALT ECRMQENIFD DDAQPENLSV KFRNAIVSGK VWQGDYCNHK RNGEFSWERA IISPVASQGE SGSHILAFMQ DITESRKNQE ALLKSNRRFR ELADLLPQPV FETDSKGFIT YSNRAGFSTF GYSRKALKQG LHALQFFAPE DKNRLMHAIR MKKNSGPSGT HEFTLFRRDG AGFPALVYTA PITERKGSGG FRGIVIDITE LKESERMLRE NRKKYLDLFQ AIPDAIIAAD AESGFLVEWN RQGQLFFGYT PEEFSRLHIG DLYPEPLREE GLAYFRNACT GQAVTLETQI VTRQGIRIDV HISSATFTTE HFRCFVGIFR DITQQKRS
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