Gene Clim_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0172 
Symbol 
ID6355825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp189952 
End bp190479 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content45% 
IMG OID642667799 
Productprotein of unknown function DUF177 
Protein accessionYP_001942250 
Protein GI189345721 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAG AAAAACCATT GATAGAGATC CGGATAGCGG GTCTTATGCA GGGAACCCAT 
ACGTTTGATT TTTCCTGCAG GGCCAAAGAT TTCAGAGGTC ATGTTCTGGC TGAAACCGTA
TTTACCCGCG ATATTGCGGT AACGGTTATC GCAGAAAAAA CCGAAAATGA ACTGACGGTC
ACCATCCGGA CAGCAACGGT AGCCGATTTT ACCTGTGATA TTTGTCTTGT TCCCCTGGCA
AGGGAAATCA GAGGCGAGTA TCGCGTATAT TATATATACA GTACGGAAGA AAAGAACCTG
GAAAGCATGG ATGATGACCA CCGCCAGATC GATCTTAATA CGGTATCCAT CGATCTGACG
GAAGATGTAC GTGAAACACT GCTGCTCTCT CTGCCAATGA AGGTTACCTG CATCGGAAAC
CCGAATTGCC GAATTTACGG CATTGAGTCA GAAAAGAACG ACTCCTGGAC CGAAGACAAA
AGTTTATGGC AGGAATCTCT TGAAAAGCTG AAAAACAAGT ATCGTTAA
 
Protein sequence
MHKEKPLIEI RIAGLMQGTH TFDFSCRAKD FRGHVLAETV FTRDIAVTVI AEKTENELTV 
TIRTATVADF TCDICLVPLA REIRGEYRVY YIYSTEEKNL ESMDDDHRQI DLNTVSIDLT
EDVRETLLLS LPMKVTCIGN PNCRIYGIES EKNDSWTEDK SLWQESLEKL KNKYR