Gene Clim_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0169 
Symbol 
ID6355822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp187597 
End bp188583 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content50% 
IMG OID642667796 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001942247 
Protein GI189345718 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTG CAATAACGGC GACAGCCAAA TATTTACCAG ACGGAGTCAT GAGTAATCAT 
GACCTCGAAC TGATGCTTGA AACCAACGAT GAATGGATTC GTTCGAGAAC CGGTATCAGT 
GAGCGGCGTA TCATGAAAGA CCCGGACAAG GCGACATCGT TCATGTGCGG CGAGGTAGCA 
AAGCAGCTCC TTGCGAAACG AGGCATCACT GCCGAAGAGG TCGAACTTAT TATTATAGCT 
ACCATGACGC CTGACATGCT GTTTCCATCG ACAGCATGCT TTGTGCAAAG CATAATCGGA 
GCGACAAAGG CATGGGCTTT CGACCTTAAT GCAGCATGTT CCGGATTTAT TTTTGCACTC 
AATACCGCAG CGCAGTTTAT TGAATCGGGA GCTCATAAAA ACGTTATGGT GATCGGAGGA 
GATAAAATGT CTTCGATCGT CGATTATACC GACCGCTCCA CCTCCATACT CTTCGGTGAC 
GGAGCTGCCG GAGTTCTTCT TGAACCGGCC AGAGATGGAT ATGGTATTCT CGATGCTCGC 
CTCTATTCCG ACGGAACAAA CGGCAAAGAT CATCTGCTGA TGACCGGTGG GGGCAGCCTG 
CATCCCGCAA CGCATGAAAC CGTCGAAAAA CGGATGCACT ACATCTATCA GGACGGAAAA 
CAGGTATTCA AGTCAGCCGT AACGGCAATG GCCGATACGG CCGCGGAAAT CATGCATCGA 
AACAATCTCG ATGCCGACAG CATATCCTGG CTGGTTCCGC ATCAGGCGAA TCAGCGCATC 
ATCAATGCGA CTGCAGAACG AATGGGCCTG AGCGGAGAAA AAGTCATATC GAACATAGCC 
CATTACGGAA ATACAACTGC AGGGACCATC CCTATCTGTC TTGCCGAACT TGATGAAACA 
CATAAGCTGG AAACCGGTTC CAATCTGGTA CTGGTGAGCT TCGGCGCCGG ATACACCTGG 
GGCGGAATGT ATATCAAATG GCAGTAA
 
Protein sequence
MKAAITATAK YLPDGVMSNH DLELMLETND EWIRSRTGIS ERRIMKDPDK ATSFMCGEVA 
KQLLAKRGIT AEEVELIIIA TMTPDMLFPS TACFVQSIIG ATKAWAFDLN AACSGFIFAL 
NTAAQFIESG AHKNVMVIGG DKMSSIVDYT DRSTSILFGD GAAGVLLEPA RDGYGILDAR 
LYSDGTNGKD HLLMTGGGSL HPATHETVEK RMHYIYQDGK QVFKSAVTAM ADTAAEIMHR 
NNLDADSISW LVPHQANQRI INATAERMGL SGEKVISNIA HYGNTTAGTI PICLAELDET 
HKLETGSNLV LVSFGAGYTW GGMYIKWQ