| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0163 |
|---|
| Symbol | |
|---|
| ID | 6356133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 181826 |
|---|
| End bp | 183286 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642667790 |
|---|
| Product | glycine dehydrogenase subunit 2 |
|---|
| Protein accession | YP_001942241 |
|---|
| Protein GI | 189345712 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.546611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAA AACTGATTTT CGATTTATCC AGAGAAGGCC GTAAAGGATA CAGCCTCTCC
GGTAACGACA TACCGGAACT CTCCATTGAA ACTGTTCTTC CGGCTAAATT TCTGAGAACC
GAACCGGCAG ATCTTCCCGA AGTTCCGGAA AGTGAAGTTG TCAGGCATTT TATCAGGCTA
TCCAACATGA ATTACCATGT TGACAAAAAC ATGTACCCTC TGGGCAGTTG CACCATGAAG
TACAATCCGA AAGTCAATGA TGCCGCCTGC GATCTGGCCG GTTTCAGCGA ACTGCACCCT
CTTCAGCCGG AAAAAACGGT TCAGGGCGCC CTGCAGATGA TGTATGAACT CAGCGGCATG
CTTGCAGAAA TCGCCGGCAT GTCCGCAGTT ACCCTGCAGC CTGCTGCAGG CGCTCACGGA
GAGTTGACAG GAATTCTGCT TATCAAAAAA TATCACGAGG CAAGAGGATC GAAACGCAGT
AAACTGCTGG TCGTAGATTC GGCTCACGGC ACAAACCCCG CTTCTGCGGC AATCGCCGGC
TATGAGATTA TTTCCGTATC GAGCAACGCC GACGGACGTA CCGATCTTGG CGATCTGAAG
GCGAAACTTG ACGGCGAGGT TGCTGCGCTC ATGCTCACAA ACCCCAATAC AATCGGCCTT
TTTGAAAAAG ATATCCTGAC CATAGCACAG ATGGTGCATG AAAACGGCAG TCTGCTTTAT
ATGGATGGCG CGAACATGAA TGCCCTGCTC GGCATCACAC GGCCTGGGGA TATGGGATTC
GATGTCGTAC ACTACAACCT CCATAAATCT TTTTCAGCCC CTCACGGCGG AGGCGGACCG
GGAAGCGGTC CGGTAGGTGT CTGCGAAAAA CTCATCCCTT ATCTGCCCGT CCCGGTTATC
GAACGGATCG AAACCCCCGA AGGAAGCTCC TTCCGTCTGA ATACGGACCA TCCGGAAAGC
ATTGGAAGAA TGATGAATTT CTATGGGAAC TTCTCGGTAC TCATCCGGGC CTATACCTAT
ATCCGCATGC TTGGAGCCAC AGGATTGAGA AGAGTTTCAG AGAATGCCAT TATCAATGCC
AACTACCTGC TCTCCCGTCT CGACAGCCGT TATGATCTGC CGTACCCGAA ACCGGTTCTG
CATGAGTTCT GTCTTTCCGG AGACAGGCAG AAAAAAGCAC ATGGAGTAAA AACACTCGAT
ATTGCCAAGC GACTGCTCGA CTACGGTTAC CATGCTCCGA CCATCTACTT CCCGCTCATT
GTCAGTGAAG CATTGATGAT CGAACCGACG GAAACCGAGA CTCGCGAAAC CCTTGATCTC
TTTGCTGAAG CCCTGCTCTG TATAGCCGAC GAAGCTGAAA ATTCACCGGA TCTGTTACGT
TCAGCCCCGG TGAACACTCC GGTCAAAAGA CTCGATGAAG CACAGGCCTC ACGACAGCTG
AATATCTGCT GTCAGGGTTG A
|
|---|
| Protein sequence | MIEKLIFDLS REGRKGYSLS GNDIPELSIE TVLPAKFLRT EPADLPEVPE SEVVRHFIRL
SNMNYHVDKN MYPLGSCTMK YNPKVNDAAC DLAGFSELHP LQPEKTVQGA LQMMYELSGM
LAEIAGMSAV TLQPAAGAHG ELTGILLIKK YHEARGSKRS KLLVVDSAHG TNPASAAIAG
YEIISVSSNA DGRTDLGDLK AKLDGEVAAL MLTNPNTIGL FEKDILTIAQ MVHENGSLLY
MDGANMNALL GITRPGDMGF DVVHYNLHKS FSAPHGGGGP GSGPVGVCEK LIPYLPVPVI
ERIETPEGSS FRLNTDHPES IGRMMNFYGN FSVLIRAYTY IRMLGATGLR RVSENAIINA
NYLLSRLDSR YDLPYPKPVL HEFCLSGDRQ KKAHGVKTLD IAKRLLDYGY HAPTIYFPLI
VSEALMIEPT ETETRETLDL FAEALLCIAD EAENSPDLLR SAPVNTPVKR LDEAQASRQL
NICCQG
|
|---|
| |