Gene Clim_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0162 
Symbol 
ID6356132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp181160 
End bp181672 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content50% 
IMG OID642667789 
ProductHNH endonuclease 
Protein accessionYP_001942240 
Protein GI189345711 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.504267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTGC TCAGTTCAAA AGTTCTGGTT CTGAACAGCA GTTACGAGCC ATTACGTATA 
TGCGACGCCC AGAAAGCCGT TCTGTTGCTC TTCGGCGGTA AGGCAGTGCC GGTCGCGCAC 
CACCCGGAGA AAGCGATCTG TACGGTTTCC TGCTGTTTTC CCCTTCCGAG CATTATCCGC 
CTGAATGTAT TTGTCAGGGT ACCCTTCAAG AAAATCATGC TGAACAAAAA AAACATTCTC 
AGAAGGGATG CGTTCCGCTG TCAGTATTGC GGAAGAACTG ATCTGCCGCT GACTGTCGAT 
CATATACTGC CCAGATCCAG AGGTGGTGAA GAATCATGGG AAAACCTGAT TACGGCCTGC 
CTCCGCTGTA ACACAAAAAA AGGGAACAGA ACACCCTCGG AAGCAGGCAT GGCAACTCGC 
TCTAAGCCGG CACGACCCAA CCATATTATC TTCATGCAGC AGTTGACAGC TTCCGTATCG 
GACGAGTGGA AGCCCTATCT GTTCATGAGC TGA
 
Protein sequence
MSLLSSKVLV LNSSYEPLRI CDAQKAVLLL FGGKAVPVAH HPEKAICTVS CCFPLPSIIR 
LNVFVRVPFK KIMLNKKNIL RRDAFRCQYC GRTDLPLTVD HILPRSRGGE ESWENLITAC 
LRCNTKKGNR TPSEAGMATR SKPARPNHII FMQQLTASVS DEWKPYLFMS