Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0138 |
Symbol | |
ID | 6356103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 152436 |
End bp | 154262 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642667761 |
Product | Radical SAM domain protein |
Protein accession | YP_001942217 |
Protein GI | 189345688 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000809293 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTTT TCAAAAACAT CTGCCTTATC GAGGCCCCTC AGGCGGTCAT TTCCCCCTTT CCCCGGTATA TCTCCGATTG CATCGGTATC TGCTATCTTG CCGCCGCCGT CGAGCATGAT GTGGAAAGTC TGGTGATTCC GGAAAACTAC TATAACGACG GTTTGTTCGA CAGCTTCAGG TTGCTGCTGA AACGGCGACC GGTCGATCTT GTCGGGATTT CGTCGATGAC CGGTTGCTTC AACAATGCGT TACGGCTTGC CGGGATTGCG AAGGAGCATA ATGTTTTTGT GGTGATGGGC GGGTTTCATC CGACGGCTCT TCCCGAGGAG GTGCTCGGAC ACTCCTGCGT GGATGCCGTC GTCATCGGTG AGGGAGAGGC GACTTTTCGC GAACTGGTTC AGAAAGGTCC CTCCAAAGAT GTTCGCGGGC TGGCTTACCG GGAGGGCGGA GGGATCGTGT ACACCGCTCC GAGGCCTGTT ATCGGCGAGA TCGATTCCAT CGCTTTTCCG TTGCGCACCC TTCGTCCGAA GCGGTATGGC GAAAAGGGTA CGGACTACTC CATCGATACC ATCTATACTT CACGCGGATG CCCCTGGTCG TGTTCGTTCT GCGCAAACGA TACCATGCAC AAGAACTGGC GCGGCAGAAG CCCTGAAAAT GTGGTCGAGG AGTTTGCCCT GCTGCACGAC CCGAAGAAAA AGAAGCTCAT CAAGATATGG GACGCCAATT TTCTCACCAA TATAAAGCGG GCTGAGACCA TCTGCGACAT GATGATCGAG CGGGGGCTTA CCAATTTCAG AATCATGACC GAGACCAGAG CGAAAGATCT GATCAGGGCG GAGCGGATTC TCGGCAAGCT TCGCAAAATC GGGTTGAGCA AGGTTGGGCT CGGTATTGAA AGCCCCAATA TCCGAACGCT CGAGCTGATG AACAAGAAGA ATGTGCTCGA CGATGTTTCG CGCGCGATAA CGCTTGTTCG CCAGAACGGC ATCGGAGCAG AGGGATACTT CATTATCGGT CATTATACGG AAACCGTCGA AGATACGCTG GTCTATCCGG AGTTTGCCAA AAGCCTCGGC CTTCGGCAGG CGCTTTTCAT GTCGATGACG CCTTATCCCG GTACGAAGAT ATTCGAGGAG TACAAAAACG AGGGAAACAT CACCTCGTTC GACTGGGATC TCTACAACAA TTTCTGTCCG GTTGTTGCAA CAAGAAGCAT GGATACTCCG ACACTGGTGG AGATGATGGT CTATTGCAAT GTGGCGTTCT GTAACTACCG CTCTGTGCTG AAGCGAAACA GCAGCGGGGG TGTGCTGATT GCCATGCTGA AGGATCTTTT TCAGCTCTGC TTTCTCATGC GGGTCAACAA GTCCATTCAG GATAAGGAAA TTCTCGATAC GGTGTTCGAT GCTTTTATCA GATATGCTGA ATCGCAGCCT GAAATAAGCT ATCAGTGCCG ACCCTCTGAT AAAAAGCTGC ATACTCCGAT TGTGGTTTCC ATTCAGCGAT CGCCGCATAA TGCGGTCGAT TTCGCTATTG AGCAGCAGGG TGAGCGACGC GTACTTGCGT TGAGCCGTCG GTTTGAGCCG TCATCGGATA CCGGTGCGGT TATCAGACTC GATGAGGTGG TCGCCGCATC GGGTTCCCTC TCCATGGACA GCCTGATGCG GTTGCTCTAC AGGAACGAGC TGATCAGAAA TAATCCGGGA AGCATGGCCG GGCAGTTGCT TTCTGTTTCT GCGGATCCGG TGTTCTGGGG CGTTTTGCGG CGGTTGTATG CGCTTTATTC GGGATCTTTC AGAAAAGAGC GTGTTGCATC GGACTGA
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Protein sequence | MSFFKNICLI EAPQAVISPF PRYISDCIGI CYLAAAVEHD VESLVIPENY YNDGLFDSFR LLLKRRPVDL VGISSMTGCF NNALRLAGIA KEHNVFVVMG GFHPTALPEE VLGHSCVDAV VIGEGEATFR ELVQKGPSKD VRGLAYREGG GIVYTAPRPV IGEIDSIAFP LRTLRPKRYG EKGTDYSIDT IYTSRGCPWS CSFCANDTMH KNWRGRSPEN VVEEFALLHD PKKKKLIKIW DANFLTNIKR AETICDMMIE RGLTNFRIMT ETRAKDLIRA ERILGKLRKI GLSKVGLGIE SPNIRTLELM NKKNVLDDVS RAITLVRQNG IGAEGYFIIG HYTETVEDTL VYPEFAKSLG LRQALFMSMT PYPGTKIFEE YKNEGNITSF DWDLYNNFCP VVATRSMDTP TLVEMMVYCN VAFCNYRSVL KRNSSGGVLI AMLKDLFQLC FLMRVNKSIQ DKEILDTVFD AFIRYAESQP EISYQCRPSD KKLHTPIVVS IQRSPHNAVD FAIEQQGERR VLALSRRFEP SSDTGAVIRL DEVVAASGSL SMDSLMRLLY RNELIRNNPG SMAGQLLSVS ADPVFWGVLR RLYALYSGSF RKERVASD
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