Gene Clim_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0138 
Symbol 
ID6356103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp152436 
End bp154262 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content53% 
IMG OID642667761 
ProductRadical SAM domain protein 
Protein accessionYP_001942217 
Protein GI189345688 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000809293 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTTT TCAAAAACAT CTGCCTTATC GAGGCCCCTC AGGCGGTCAT TTCCCCCTTT 
CCCCGGTATA TCTCCGATTG CATCGGTATC TGCTATCTTG CCGCCGCCGT CGAGCATGAT
GTGGAAAGTC TGGTGATTCC GGAAAACTAC TATAACGACG GTTTGTTCGA CAGCTTCAGG
TTGCTGCTGA AACGGCGACC GGTCGATCTT GTCGGGATTT CGTCGATGAC CGGTTGCTTC
AACAATGCGT TACGGCTTGC CGGGATTGCG AAGGAGCATA ATGTTTTTGT GGTGATGGGC
GGGTTTCATC CGACGGCTCT TCCCGAGGAG GTGCTCGGAC ACTCCTGCGT GGATGCCGTC
GTCATCGGTG AGGGAGAGGC GACTTTTCGC GAACTGGTTC AGAAAGGTCC CTCCAAAGAT
GTTCGCGGGC TGGCTTACCG GGAGGGCGGA GGGATCGTGT ACACCGCTCC GAGGCCTGTT
ATCGGCGAGA TCGATTCCAT CGCTTTTCCG TTGCGCACCC TTCGTCCGAA GCGGTATGGC
GAAAAGGGTA CGGACTACTC CATCGATACC ATCTATACTT CACGCGGATG CCCCTGGTCG
TGTTCGTTCT GCGCAAACGA TACCATGCAC AAGAACTGGC GCGGCAGAAG CCCTGAAAAT
GTGGTCGAGG AGTTTGCCCT GCTGCACGAC CCGAAGAAAA AGAAGCTCAT CAAGATATGG
GACGCCAATT TTCTCACCAA TATAAAGCGG GCTGAGACCA TCTGCGACAT GATGATCGAG
CGGGGGCTTA CCAATTTCAG AATCATGACC GAGACCAGAG CGAAAGATCT GATCAGGGCG
GAGCGGATTC TCGGCAAGCT TCGCAAAATC GGGTTGAGCA AGGTTGGGCT CGGTATTGAA
AGCCCCAATA TCCGAACGCT CGAGCTGATG AACAAGAAGA ATGTGCTCGA CGATGTTTCG
CGCGCGATAA CGCTTGTTCG CCAGAACGGC ATCGGAGCAG AGGGATACTT CATTATCGGT
CATTATACGG AAACCGTCGA AGATACGCTG GTCTATCCGG AGTTTGCCAA AAGCCTCGGC
CTTCGGCAGG CGCTTTTCAT GTCGATGACG CCTTATCCCG GTACGAAGAT ATTCGAGGAG
TACAAAAACG AGGGAAACAT CACCTCGTTC GACTGGGATC TCTACAACAA TTTCTGTCCG
GTTGTTGCAA CAAGAAGCAT GGATACTCCG ACACTGGTGG AGATGATGGT CTATTGCAAT
GTGGCGTTCT GTAACTACCG CTCTGTGCTG AAGCGAAACA GCAGCGGGGG TGTGCTGATT
GCCATGCTGA AGGATCTTTT TCAGCTCTGC TTTCTCATGC GGGTCAACAA GTCCATTCAG
GATAAGGAAA TTCTCGATAC GGTGTTCGAT GCTTTTATCA GATATGCTGA ATCGCAGCCT
GAAATAAGCT ATCAGTGCCG ACCCTCTGAT AAAAAGCTGC ATACTCCGAT TGTGGTTTCC
ATTCAGCGAT CGCCGCATAA TGCGGTCGAT TTCGCTATTG AGCAGCAGGG TGAGCGACGC
GTACTTGCGT TGAGCCGTCG GTTTGAGCCG TCATCGGATA CCGGTGCGGT TATCAGACTC
GATGAGGTGG TCGCCGCATC GGGTTCCCTC TCCATGGACA GCCTGATGCG GTTGCTCTAC
AGGAACGAGC TGATCAGAAA TAATCCGGGA AGCATGGCCG GGCAGTTGCT TTCTGTTTCT
GCGGATCCGG TGTTCTGGGG CGTTTTGCGG CGGTTGTATG CGCTTTATTC GGGATCTTTC
AGAAAAGAGC GTGTTGCATC GGACTGA
 
Protein sequence
MSFFKNICLI EAPQAVISPF PRYISDCIGI CYLAAAVEHD VESLVIPENY YNDGLFDSFR 
LLLKRRPVDL VGISSMTGCF NNALRLAGIA KEHNVFVVMG GFHPTALPEE VLGHSCVDAV
VIGEGEATFR ELVQKGPSKD VRGLAYREGG GIVYTAPRPV IGEIDSIAFP LRTLRPKRYG
EKGTDYSIDT IYTSRGCPWS CSFCANDTMH KNWRGRSPEN VVEEFALLHD PKKKKLIKIW
DANFLTNIKR AETICDMMIE RGLTNFRIMT ETRAKDLIRA ERILGKLRKI GLSKVGLGIE
SPNIRTLELM NKKNVLDDVS RAITLVRQNG IGAEGYFIIG HYTETVEDTL VYPEFAKSLG
LRQALFMSMT PYPGTKIFEE YKNEGNITSF DWDLYNNFCP VVATRSMDTP TLVEMMVYCN
VAFCNYRSVL KRNSSGGVLI AMLKDLFQLC FLMRVNKSIQ DKEILDTVFD AFIRYAESQP
EISYQCRPSD KKLHTPIVVS IQRSPHNAVD FAIEQQGERR VLALSRRFEP SSDTGAVIRL
DEVVAASGSL SMDSLMRLLY RNELIRNNPG SMAGQLLSVS ADPVFWGVLR RLYALYSGSF
RKERVASD