Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0096 |
Symbol | |
ID | 6355620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 102824 |
End bp | 103399 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642667720 |
Product | TPR repeat-containing protein |
Protein accession | YP_001942181 |
Protein GI | 189345652 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00110052 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCATA CAAGAACAAG TGCCCTGCTG TTTTCCGTTA CAGCTATCCT GCTGCTTTTT GCAAGCGCCA CTGCTGCCGG CGGGCAGGAA AACGATTATT TCAACAGAGG ATATGAAAAA CACCTGCAGG GAGATATCAA GGCGGCAATG AAGGATTACT CCTCGGCGAT TGAAATAAAT CCCCGATTTG CCATGGCTTA CCAGATGAGA GGAGCCGTCT GGCAGAGAAT GAAAATGTAC GACAAAGCCA TCAATGACTA TTCCATGGTG GTCGTTTTCG GTGAAACCTA TTTTAAGGCC GTCGGTTACT ACAACCGCGG GATCGTAAAA AATATGGCCG GTGATTTCTT CGGAGCGATT GCCGATTTTA ACGAGGCACT GAACATCGAC AAGAGAATGG TGGCGGCTTA TTTTCACCGC GGCATTGCCA AAAGCCGGAC AGGAGACTCT TTCGGCCGAA TCCAGGACTT CCGGGAAGCG GCAAGGCTCG GCGATGTCAA TGCCGAAAAG TGGCTGAACA CCTACTATCC CACCTGGAAA CAGCCGGTAG CTTCTGCTTT GCCTCAGACT AACTGA
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Protein sequence | MMHTRTSALL FSVTAILLLF ASATAAGGQE NDYFNRGYEK HLQGDIKAAM KDYSSAIEIN PRFAMAYQMR GAVWQRMKMY DKAINDYSMV VVFGETYFKA VGYYNRGIVK NMAGDFFGAI ADFNEALNID KRMVAAYFHR GIAKSRTGDS FGRIQDFREA ARLGDVNAEK WLNTYYPTWK QPVASALPQT N
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